Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037744 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 7.7e-59 230.3 121 100.0
CSS0000980 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 3.8e-42 174.9 115 82.6
CSS0025559 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 1.5e-41 172.9 115 81.7
Dinv24348 Davidia involucrata HOM05D001089 ORTHO05D000920 1.7e-37 159.5 119 74.8
Dinv00316 Davidia involucrata HOM05D001089 ORTHO05D000920 2.2e-37 159.1 119 75.6
Dinv06074 Davidia involucrata HOM05D001089 ORTHO05D000920 2.2e-37 159.1 119 75.6
GSVIVG01026493001 Vitis vinifera HOM05D001089 ORTHO05D000920 2.8e-37 158.7 121 72.7
DCAR_001343 Daucus carota HOM05D001089 ORTHO05D000920 2.0e-35 152.5 101 75.2
Actinidia06627 Actinidia chinensis HOM05D001089 ORTHO05D000920 1.3e-34 149.8 109 75.2
SalBow1G1293 Salvia bowleyana HOM05D001089 ORTHO05D000920 3.3e-33 145.2 106 70.8
Lj2A605T66 Lonicera japonica HOM05D001089 ORTHO05D000920 4.3e-33 144.8 121 69.4
Migut.H00726 Erythranthe guttata HOM05D001089 ORTHO05D000920 7.3e-33 144.1 117 67.5
Rhsim08G0003000 Rhododendron simsii HOM05D001089 ORTHO05D000920 1.6e-32 142.9 127 65.4
Haze_25224 Corylus avellana HOM05D001089 ORTHO05D000920 1.0e-31 140.2 119 65.5
Hma1.2p1_0476F.1_g160890 Hydrangea macrophylla HOM05D001089 ORTHO05D000920 1.0e-31 140.2 120 65.8
PGSC0003DMG400028664 Solanum tuberosum HOM05D001089 ORTHO05D000920 2.3e-31 139.0 120 64.2
TAR625G0745 Trochodendron aralioides HOM05D001089 ORTHO05D000920 5.2e-31 137.9 119 63.0
MSTRG.2658 Avicennia marina HOM05D001089 ORTHO05D000920 8.9e-31 137.1 121 61.2
CiPaw.03G122500 Carya illinoinensis HOM05D001089 ORTHO05D000920 2.6e-30 135.6 119 63.0
Sopen11g001890 Solanum pennellii HOM05D001089 ORTHO05D000920 3.4e-30 135.2 120 62.5
Psat0s145g0080 Pisum sativum HOM05D001089 ORTHO05D000920 4.4e-30 134.8 110 65.5
MD15G1343000 Malus domestica HOM05D001089 ORTHO05D000920 5.7e-30 134.4 95 69.5
CiPaw.04G082900 Carya illinoinensis HOM05D001089 ORTHO05D000920 7.5e-30 134.0 115 65.2
Solyc11g005950.2 Solanum lycopersicum HOM05D001089 ORTHO05D000920 1.3e-29 133.3 120 61.7
CAN.G652.10 Capsicum annuum HOM05D001089 ORTHO05D000920 3.7e-29 131.7 105 65.7
Peaxi162Scf00589g00417 Petunia axillaris HOM05D001089 ORTHO05D000920 3.7e-29 131.7 107 63.6
Eucgr.I00209 Eucalyptus grandis HOM05D001089 ORTHO05D000920 8.3e-29 130.6 113 63.7
Medtr3g096160 Medicago truncatula HOM05D001089 ORTHO05D000920 8.3e-29 130.6 96 68.8
Oeu047693.2 Olea europaea HOM05D001089 ORTHO05D000920 8.3e-29 130.6 119 63.9
SGA_v2.0_scaffold370G50128 Striga asiatica HOM05D001089 ORTHO05D000920 8.3e-29 130.6 120 62.5
vmacro18665 Vaccinium macrocarpon HOM05D001089 ORTHO05D000920 1.1e-28 130.2 123 61.8
Nitab4.5_0000856g0030 Nicotiana tabacum HOM05D001089 ORTHO05D000920 1.4e-28 129.8 113 64.6
CANSAT01G2678 Cannabis sativa HOM05D001089 ORTHO05D000920 1.8e-28 129.4 111 63.1
Cpa.g.sc42.147 Carica papaya HOM05D001089 ORTHO05D000920 1.8e-28 129.4 121 57.9
MSTRG.23450 Avicennia marina HOM05D001089 ORTHO05D000920 3.2e-28 128.6 120 62.5
Cc07_g18410 Coffea canephora HOM05D001089 ORTHO05D000920 3.2e-28 128.6 108 63.9
Hund07258 Selenicereus undatus HOM05D001089 ORTHO05D000920 7.0e-28 127.5 117 62.4
Ca_16942_v3 Cicer arietinum L. HOM05D001089 ORTHO05D000920 1.2e-27 126.7 126 56.3
Ca_16961_v3 Cicer arietinum L. HOM05D001089 ORTHO05D000920 1.2e-27 126.7 126 56.3
Nn5g28573 Nelumbo nucifera HOM05D001089 ORTHO05D000920 1.2e-27 126.7 121 62.0
FvH4_1g24270 Fragaria vesca HOM05D001089 ORTHO05D000920 2.0e-27 125.9 99 67.7
FAN23G0235 Fragaria x ananassa HOM05D001089 ORTHO05D000920 2.0e-27 125.9 106 64.2
FAN23G1912 Fragaria x ananassa HOM05D001089 ORTHO05D000920 2.0e-27 125.9 106 64.2
QL06p028744 Quercus lobata HOM05D001089 ORTHO05D000920 2.0e-27 125.9 123 61.0
Sabra05G0050400 Salix brachista HOM05D001089 ORTHO05D000920 2.0e-27 125.9 120 59.2
FAN19G0489 Fragaria x ananassa HOM05D001089 ORTHO05D000920 2.7e-27 125.6 106 64.2
FAN26G1131 Fragaria x ananassa HOM05D001089 ORTHO05D000920 3.5e-27 125.2 105 63.8
Potri.007G109300 Populus trichocarpa HOM05D001089 ORTHO05D000920 3.5e-27 125.2 107 61.7
RcHm_v2.0_Chr2g0120761 Rosa chinensis HOM05D001089 ORTHO05D000920 3.5e-27 125.2 97 68.0
Aqoxy6G00353 Aquilegia oxysepala HOM05D001089 ORTHO05D000920 5.9e-27 124.4 100 64.0
TAR381G1408 Trochodendron aralioides HOM05D001089 ORTHO05D000920 5.9e-27 124.4 121 59.5
arahy.Tifrunner.gnm1.ann1.8KPX0U Arachis hypogaea HOM05D001089 ORTHO05D000920 7.8e-27 124.0 127 55.1
Lj1g0012030 Lotus japonicus HOM05D001089 ORTHO05D000920 7.8e-27 124.0 93 64.5
Manes.12G154700 Manihot esculenta HOM05D001089 ORTHO05D000920 7.8e-27 124.0 121 59.5
Sabra07G0089400 Salix brachista HOM05D001089 ORTHO05D000920 7.8e-27 124.0 107 57.9
arahy.Tifrunner.gnm1.ann1.DVCH10 Arachis hypogaea HOM05D001089 ORTHO05D000920 1.0e-26 123.6 127 54.3
Manes.13G083500 Manihot esculenta HOM05D001089 ORTHO05D000920 1.0e-26 123.6 124 54.8
PGR079G0003 Punica granatum HOM05D001089 ORTHO05D000920 1.3e-26 123.2 96 67.7
PGR119G0584 Punica granatum HOM05D001089 ORTHO05D000920 1.3e-26 123.2 96 67.7
FAN28G1888 Fragaria x ananassa HOM05D001089 ORTHO05D000920 2.3e-26 122.5 101 65.3
ClCG01G015410 Citrullus lanatus HOM05D001089 ORTHO05D000920 5.0e-26 121.3 118 59.3
Nn1g06255 Nelumbo nucifera HOM05D001089 ORTHO05D000920 5.0e-26 121.3 121 60.3
Potri.005G058700 Populus trichocarpa HOM05D001089 ORTHO05D000920 5.0e-26 121.3 109 61.5
TWI79G0009 Tripterygium wilfordii HOM05D001089 ORTHO05D000920 5.0e-26 121.3 114 59.6
arahy.Tifrunner.gnm1.ann1.0Z2KWF Arachis hypogaea HOM05D001089 ORTHO05D000920 6.6e-26 120.9 116 59.5
arahy.Tifrunner.gnm1.ann1.1K4FZB Arachis hypogaea HOM05D001089 ORTHO05D000920 8.6e-26 120.6 116 58.6
Duzib187G1565 Durio zibethinus HOM05D001089 ORTHO05D000920 1.1e-25 120.2 100 67.0
MELO3C008057.2 Cucumis melo HOM05D001089 ORTHO05D000920 1.5e-25 119.8 118 60.2
CsaV3_6G041630 Cucumis sativus L. HOM05D001089 ORTHO05D000920 1.5e-25 119.8 118 61.0
Oeu037815.1 Olea europaea HOM05D001089 ORTHO05D000920 1.5e-25 119.8 111 61.3
Sed0015585 Sechium edule HOM05D001089 ORTHO05D000920 1.5e-25 119.8 121 56.2
SGA_v2.0_scaffold289G47265 Striga asiatica HOM05D001089 ORTHO05D000920 1.9e-25 119.4 105 61.0
Glyma.04G213200 Glycine max HOM05D001089 ORTHO05D000920 3.3e-25 118.6 93 64.5
Lalb_Chr12g0203151 Lupinus albus HOM05D001089 ORTHO05D000920 5.6e-25 117.9 103 60.2
TWI75G1424 Tripterygium wilfordii HOM05D001089 ORTHO05D000920 5.6e-25 117.9 92 64.1
Lalb_Chr13g0296591 Lupinus albus HOM05D001089 ORTHO05D000920 1.2e-24 116.7 97 64.9
Glyma.06G153000 Glycine max HOM05D001089 ORTHO05D000920 3.6e-24 115.2 97 64.9
Phvul.009G150200 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 6.2e-24 114.4 95 65.3
Thecc.01G131000 Theobroma cacao HOM05D001089 ORTHO05D000920 8.0e-24 114.0 114 60.5
Duzib264G1113 Durio zibethinus HOM05D001089 ORTHO05D000920 1.0e-23 113.6 117 59.0
VMungo1309G0318 Vigna mungo HOM05D001089 ORTHO05D000920 2.3e-23 112.5 95 65.3
Sopen04g023170 Solanum pennellii HOM05D002118 ORTHO05D002356 3.1e-23 112.1 84 66.7
AUR62000494 Chenopodium quinoa HOM05D001089 ORTHO05D000920 4.0e-23 111.7 116 56.9
PSO541G3549 Papaver somniferum HOM05D001089 ORTHO05D000920 4.0e-23 111.7 125 53.6
Ciclev10000740m.g Citrus clementina HOM05D001089 ORTHO05D000920 6.8e-23 110.9 109 56.9
AUR62006839 Chenopodium quinoa HOM05D001089 ORTHO05D000920 3.4e-22 108.6 116 55.2
PSO675G2547 Papaver somniferum HOM05D001089 ORTHO05D000920 3.4e-22 108.6 127 53.5
unitig_736.g22682 Utricularia gibba HOM05D001089 ORTHO05D000920 4.4e-22 108.2 92 60.9
COL.COLO4_35730 Corchorus olitorius HOM05D001089 ORTHO05D000920 5.8e-22 107.8 92 66.3
Gohir.A05G385500 Gossypium hirsutum HOM05D001089 ORTHO05D000920 1.7e-21 106.3 95 64.2
AL3G45550 Arabidopsis lyrata HOM05D001089 ORTHO05D000920 2.2e-21 105.9 117 53.8
EL10Ac4g09595 Beta vulgaris HOM05D001089 ORTHO05D000920 2.2e-21 105.9 117 53.8
Gohir.D04G022700 Gossypium hirsutum HOM05D001089 ORTHO05D000920 2.9e-21 105.5 95 64.2
Gorai.012G034300 Gossypium raimondii HOM05D001089 ORTHO05D000920 2.9e-21 105.5 95 64.2
unitig_899.g14693 Utricularia gibba HOM05D001089 ORTHO05D000920 1.4e-20 103.2 92 59.8
Carub.0003s2818 Capsella rubella HOM05D001089 ORTHO05D000920 4.1e-20 101.7 120 51.7
THA.LOC104807158 Tarenaya hassleriana HOM05D001089 ORTHO05D000920 5.4e-20 101.3 131 49.6
Thhalv10022633m.g Eutrema salsugineum HOM05D001089 ORTHO05D000920 2.0e-19 99.4 94 56.4
Phvul.002G271800 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 3.5e-19 98.6 93 60.2
Ah.06g190850 Amaranthus hybridus HOM05D001089 ORTHO05D000920 1.3e-18 96.7 107 54.2
BcaB03g16217 Brassica carinata HOM05D001089 ORTHO05D000920 1.3e-18 96.7 94 56.4
Aa31LG8G12340 Aethionema arabicum HOM05D001089 ORTHO05D000920 1.7e-18 96.3 116 52.6
AT2G13690 Arabidopsis thaliana HOM05D001089 ORTHO05D000920 6.6e-18 94.4 99 53.5
C07p09160 Brassica napus HOM05D001089 ORTHO05D000920 6.6e-18 94.4 94 53.2
BolC7t41328H Brassica oleracea HOM05D001089 ORTHO05D000920 6.6e-18 94.4 94 53.2
VMungo0251G1012 Vigna mungo HOM05D001089 ORTHO05D000920 6.6e-18 94.4 93 57.0
CARHR104740 Cardamine hirsuta HOM05D001089 ORTHO05D000920 1.1e-17 93.6 94 53.2
Glyma.05G191400 Glycine max HOM05D001089 ORTHO05D000920 2.5e-17 92.4 121 49.6
Sp3g27080 Schrenkiella parvula HOM05D001089 ORTHO05D000920 2.5e-17 92.4 94 53.2
CDE08G0610 Ceratophyllum demersum HOM05D001089 ORTHO05D000920 2.8e-16 89.0 92 52.2
BcaC06g35996 Brassica carinata HOM05D001089 ORTHO05D000920 1.4e-12 76.6 76 55.3
A07p05990 Brassica napus HOM05D001089 ORTHO05D000920 3.2e-12 75.5 72 55.6
ATR1136G097 Amborella trichopoda HOM05D001089 ORTHO05D000920 3.5e-11 72.0 109 36.7
HPP92_009284 Vanilla planifolia HOM05D001089 ORTHO05D000920 6.0e-11 71.2 119 39.5
Os04g0278000 Oryza sativa ssp. japonica HOM05D001089 ORTHO05D000920 7.3e-09 64.3 101 39.6
Zm00001eb304710 Zea mays HOM05D001089 ORTHO05D000920 9.5e-09 63.9 107 37.4
Zm00001eb097130 Zea mays HOM05D001089 ORTHO05D000920 1.4e-07 60.1 103 37.9
AUR62003212 Chenopodium quinoa HOM05D001089 ORTHO05D000920 2.0e-06 56.2 109 32.1
Os07g0259700 Oryza sativa ssp. japonica HOM05D001089 ORTHO05D000920 2.6e-06 55.8 92 40.2
Eucgr.B02440 Eucalyptus grandis HOM05D001089 ORTHO05D000920 3.4e-06 55.5 105 35.2
Zm00001eb211020 Zea mays HOM05D001089 ORTHO05D000920 3.4e-06 55.5 99 33.3
Dinv39935 Davidia involucrata HOM05D001089 ORTHO05D000920 4.4e-06 55.1 102 31.4
ECA246G2309 Erigeron canadensis HOM05D001089 ORTHO05D000920 4.4e-06 55.1 115 31.3
Lj4C134G13 Lonicera japonica HOM05D001089 ORTHO05D000920 4.4e-06 55.1 102 34.3
Hund14128 Selenicereus undatus HOM05D001089 ORTHO05D000920 4.4e-06 55.1 116 31.9
AUR62008034 Chenopodium quinoa HOM05D001089 ORTHO05D000920 5.8e-06 54.7 109 32.1
Sc03g0001060 Simmondsia chinensis HOM05D001089 ORTHO05D000920 5.8e-06 54.7 102 36.3
Manes.11G138100 Manihot esculenta HOM05D001089 ORTHO05D000920 7.6e-06 54.3 94 33.0
COL.COLO4_22161 Corchorus olitorius HOM05D001089 ORTHO05D000920 9.9e-06 53.9 99 33.3
Lalb_Chr05g0227381 Lupinus albus HOM05D001089 ORTHO05D000920 9.9e-06 53.9 99 32.3
Potri.007G032800 Populus trichocarpa HOM05D001089 ORTHO05D000920 9.9e-06 53.9 107 31.8
Sabra07G0028700 Salix brachista HOM05D001089 ORTHO05D000920 9.9e-06 53.9 107 31.8
Hund16570 Selenicereus undatus HOM05D001089 ORTHO05D000920 9.9e-06 53.9 109 33.9


User provided reference genes

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