Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.6e-102 374.8 174 100.0
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.5e-87 326.2 172 87.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 8.4e-83 310.5 193 75.6
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.1e-82 310.1 181 79.6
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.4e-82 309.7 172 82.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.4e-82 308.9 172 79.7
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 5.5e-82 307.8 172 82.0
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 9.3e-82 307.0 172 81.4
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.0e-80 303.5 172 77.9
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 3.0e-80 302.0 173 81.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.9e-80 301.6 174 81.6
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 8.7e-80 300.4 172 79.7
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 8.7e-80 300.4 173 80.9
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 1.1e-79 300.1 172 78.5
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.5e-79 299.7 173 80.3
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.5e-79 298.9 172 78.5
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 3.3e-79 298.5 172 77.9
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 5.6e-79 297.7 172 77.9
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 5.6e-79 297.7 172 78.5
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.6e-79 297.7 173 80.9
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 7.4e-79 297.4 172 79.7
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 9.6e-79 297.0 172 80.8
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.6e-79 297.0 172 76.7
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.1e-78 295.8 172 76.7
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 2.8e-78 295.4 172 77.9
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 6.2e-78 294.3 174 77.0
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 8.2e-78 293.9 174 77.6
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 8.2e-78 293.9 172 77.9
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.1e-77 293.5 172 76.7
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.4e-77 293.1 172 77.9
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.4e-77 293.1 172 76.7
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.8e-77 292.7 172 78.5
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.8e-77 292.7 178 75.8
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 3.1e-77 292.0 173 78.6
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 4.0e-77 291.6 172 78.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.2e-76 290.0 172 76.7
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 3.4e-76 288.5 217 66.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 4.5e-76 288.1 174 77.0
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 5.8e-76 287.7 172 77.9
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 5.8e-76 287.7 172 76.7
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 7.6e-76 287.3 172 76.2
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 7.6e-76 287.3 174 75.9
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 7.6e-76 287.3 192 71.4
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.7e-75 286.2 172 76.2
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 2.2e-75 285.8 208 65.9
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 2.9e-75 285.4 177 74.6
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 4.9e-75 284.6 186 71.5
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 6.5e-75 284.3 172 75.0
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.1e-74 283.5 172 75.6
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.9e-74 282.7 173 75.7
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 4.2e-74 281.6 184 72.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.6e-73 279.6 173 76.3
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.1e-73 279.3 176 73.9
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.0e-73 277.7 180 72.8
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.0e-72 276.9 173 75.1
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.3e-72 276.6 172 71.5
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.9e-72 275.0 172 72.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 3.3e-71 271.9 183 71.0
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 4.3e-71 271.6 173 73.4
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 5.7e-71 271.2 172 70.3
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 5.7e-71 271.2 173 72.3
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 7.4e-71 270.8 173 72.8
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 9.7e-71 270.4 172 69.8
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 2.8e-70 268.9 183 69.9
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 8.2e-70 267.3 173 69.9
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.2e-70 267.3 172 70.3
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 8.2e-70 267.3 172 70.3
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.1e-69 266.9 172 69.8
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.4e-69 265.8 172 70.9
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 3.1e-69 265.4 172 69.2
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 9.0e-69 263.8 172 69.2
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 9.0e-69 263.8 172 69.2
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 9.0e-69 263.8 172 69.2
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.0e-68 262.7 172 69.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.3e-67 260.0 173 67.6
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.7e-67 259.6 172 69.2
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 5.5e-66 254.6 174 69.0
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 2.7e-65 252.3 143 81.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 7.9e-65 250.8 173 69.4
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 5.1e-64 248.1 136 83.1
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 4.3e-63 245.0 172 64.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.8e-62 242.3 172 64.0
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.4e-61 240.0 173 64.2
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 7.7e-60 234.2 143 72.7
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.1e-58 230.3 225 52.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 8.2e-54 214.2 150 63.3
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 3.1e-53 212.2 158 63.9
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.1e-53 211.8 151 63.6
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.2e-49 200.3 180 59.4
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.2e-49 200.3 170 57.6
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 3.7e-46 188.7 113 77.0
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 2.5e-42 176.0 113 68.1
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.0e-40 170.6 88 88.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 3.0e-40 169.1 91 83.5
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 3.3e-39 165.6 88 86.4
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.4e-39 165.2 89 82.0
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 5.3e-37 158.3 109 70.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.0e-32 144.1 183 44.3
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 4.4e-31 138.7 88 70.5
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 5.4e-29 131.7 87 66.7
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.2e-28 130.6 84 69.0
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.6e-28 130.2 172 41.9
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 4.2e-26 122.1 59 89.8
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.1e-25 119.8 65 78.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 8.0e-25 117.9 59 83.1
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 4.0e-24 115.5 64 79.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 6.3e-22 108.2 225 32.4
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.7e-19 100.1 117 42.7
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.5e-18 96.3 84 51.2
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 4.7e-17 92.0 174 34.5
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.6e-15 86.3 211 31.3
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 2.9e-14 82.8 50 78.0
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 2.1e-09 66.6 58 53.4
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 6.8e-08 61.6 47 57.4


User provided reference genes

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