Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 9.4e-178 626.7 307 100.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.3e-176 622.1 307 99.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.8e-158 562.0 307 87.9
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.4e-157 559.7 307 88.6
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.6e-156 556.2 307 87.0
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 2.0e-156 555.8 307 87.9
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.4e-152 543.1 307 85.3
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.4e-152 543.1 307 85.3
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 1.8e-152 542.7 307 85.7
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 4.4e-151 538.1 307 83.1
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 5.7e-151 537.7 307 85.0
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 7.5e-151 537.3 307 84.7
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 7.5e-151 537.3 307 85.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 9.8e-151 537.0 307 84.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 9.8e-151 537.0 307 83.4
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.1e-149 531.6 307 81.4
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 5.4e-149 531.2 307 84.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 7.0e-149 530.8 307 81.8
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.7e-148 528.9 307 81.4
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 83.1
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.0e-147 526.9 307 83.1
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.2e-147 525.8 307 82.4
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.8e-147 525.0 307 81.4
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 80.8
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 81.1
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 82.4
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 82.4
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 82.4
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.9e-146 522.7 307 82.4
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 2.5e-146 522.3 307 82.4
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 2.5e-146 522.3 307 83.1
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 81.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 5.5e-146 521.2 307 82.1
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 5.5e-146 521.2 307 83.1
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.2e-145 520.0 370 71.9
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.1e-145 519.2 307 79.8
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 8.0e-145 517.3 307 81.1
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 80.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 79.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 78.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 78.8
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 81.8
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 80.1
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 5.2e-144 514.6 307 79.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.8e-144 514.2 307 80.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 8.8e-144 513.8 358 71.8
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 78.8
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 78.5
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 81.8
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 78.5
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 80.5
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 80.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.4e-141 506.5 307 79.8
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.4e-141 505.8 304 78.3
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-141 505.4 323 76.8
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 3.1e-141 505.4 307 80.1
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 77.5
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 2.0e-140 502.7 391 66.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.7e-140 502.3 307 76.9
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 4.5e-140 501.5 288 83.3
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 78.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 76.5
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 4.0e-136 488.4 371 66.3
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 5.2e-136 488.0 307 74.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 5.2e-136 488.0 307 74.9
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 8.9e-136 487.3 307 75.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 4.4e-135 485.0 306 74.5
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.2e-134 482.6 307 75.2
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 5.9e-132 474.6 306 73.5
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 9.5e-130 467.2 307 71.0
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.0e-128 463.8 274 83.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.9e-126 455.7 276 80.1
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.4e-125 452.6 276 79.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 2.4e-125 452.6 307 72.6
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 7.0e-125 451.1 277 81.6
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 9.2e-125 450.7 307 71.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 9.5e-122 440.7 276 74.6
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 8.1e-121 437.6 277 75.1
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 1.8e-120 436.4 292 74.0
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 5.2e-120 434.9 276 75.0
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 5.6e-114 414.8 235 85.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.2e-113 413.7 243 81.9
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 2.1e-113 412.9 312 65.1
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 4.9e-110 401.7 310 63.5
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.9e-106 389.8 307 64.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.4e-103 378.6 297 62.3
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.9e-101 373.2 306 57.5
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.9e-98 363.2 236 74.6
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 4.5e-79 298.9 316 48.7
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 7.6e-79 298.1 248 62.9
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.9e-78 296.2 190 72.1
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.1e-64 249.2 170 76.5
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 7.9e-60 235.0 131 84.0
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 5.7e-58 228.8 310 41.6
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.4e-56 224.2 148 73.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 3.4e-55 219.5 565 28.7
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 5.0e-54 215.7 332 41.6
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 7.0e-24 115.5 72 76.4
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 4.5e-23 112.8 96 52.1
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.3e-21 106.3 87 63.2
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.6e-20 103.2 221 31.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 5.7e-18 95.9 140 45.0
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 4.1e-08 63.2 34 88.2
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 7.0e-08 62.4 39 74.4


User provided reference genes

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