Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.1e-138 496.5 240 100.0
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 2.8e-121 438.7 232 89.7
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 8.2e-121 437.2 232 90.1
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.2e-119 433.3 230 87.0
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 3.5e-119 431.8 232 89.2
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 4.5e-119 431.4 228 89.5
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.0e-118 430.3 231 87.0
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.3e-118 429.9 231 87.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.0e-118 427.9 228 87.3
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.9e-117 426.0 232 88.4
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 2.5e-117 425.6 224 87.1
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.5e-117 425.6 229 87.8
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 4.2e-117 424.9 232 85.3
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.2e-117 424.9 230 87.4
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 5.5e-117 424.5 230 86.5
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 5.5e-117 424.5 229 87.8
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.2e-116 423.3 229 87.8
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 2.1e-116 422.5 232 86.6
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.1e-116 422.5 230 87.4
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 2.7e-116 422.2 222 87.4
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 3.6e-116 421.8 225 86.7
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 3.6e-116 421.8 230 86.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 4.7e-116 421.4 229 86.9
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 8.0e-116 420.6 229 86.9
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 1.4e-115 419.9 229 87.3
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.0e-115 418.7 231 85.3
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 3.0e-115 418.7 229 87.3
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 6.7e-115 417.5 230 85.2
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 6.7e-115 417.5 225 86.2
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 8.8e-115 417.2 231 84.4
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 8.8e-115 417.2 232 84.1
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.0e-114 416.0 229 84.3
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 2.6e-114 415.6 230 86.1
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.6e-114 415.6 235 83.8
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.6e-114 415.6 229 86.5
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 3.3e-114 415.2 234 85.9
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 4.4e-114 414.8 231 84.0
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 5.7e-114 414.5 230 85.2
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 7.5e-114 414.1 231 85.7
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 9.7e-114 413.7 229 85.2
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 9.7e-114 413.7 229 84.7
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.7e-113 411.8 228 84.6
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 4.8e-113 411.4 229 85.6
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 6.3e-113 411.0 228 85.1
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 8.2e-113 410.6 232 82.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.4e-112 409.8 234 84.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.4e-112 409.8 234 84.2
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.4e-112 409.8 229 83.8
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 1.8e-112 409.5 230 83.5
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.8e-112 409.5 229 84.3
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 2.4e-112 409.1 233 83.3
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.1e-112 408.7 228 85.1
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 3.1e-112 408.7 229 84.3
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 4.1e-112 408.3 229 83.4
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 5.3e-112 407.9 222 85.1
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.2e-111 406.8 232 84.5
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.6e-111 406.4 226 87.2
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.6e-111 406.4 229 83.8
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-111 406.0 228 82.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-111 406.0 228 82.9
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 3.5e-111 405.2 229 83.8
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.5e-111 405.2 230 83.0
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 4.5e-111 404.8 232 82.8
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 7.7e-111 404.1 230 82.6
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.0e-110 403.7 228 84.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.9e-110 402.1 230 82.6
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.8e-110 401.7 230 82.6
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 3.8e-110 401.7 231 81.8
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.8e-110 401.7 229 83.8
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 5.0e-110 401.4 229 82.1
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 8.5e-110 400.6 232 81.5
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.1e-109 400.2 225 83.6
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.9e-109 399.4 230 81.7
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.9e-109 399.4 226 84.5
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 4.2e-109 398.3 230 81.7
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 7.2e-109 397.5 288 69.1
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.2e-109 397.5 229 81.2
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.2e-109 397.5 229 81.2
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 7.2e-109 397.5 222 84.7
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.7e-108 395.6 230 80.9
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 6.1e-108 394.4 233 81.1
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 8.0e-108 394.0 222 83.8
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 8.0e-108 394.0 228 80.7
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.0e-107 393.7 232 81.5
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 1.8e-107 392.9 235 79.1
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.8e-107 392.9 235 79.1
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 1.8e-107 392.9 235 79.1
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 1.8e-107 392.9 229 79.9
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 6.8e-107 391.0 231 81.0
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 8.8e-107 390.6 228 81.6
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 8.8e-107 390.6 233 81.5
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 1.2e-106 390.2 228 79.8
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.2e-106 390.2 211 87.2
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.2e-106 390.2 232 81.5
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.5e-106 389.8 235 79.6
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 2.6e-106 389.0 228 79.4
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 5.7e-106 387.9 235 78.3
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 5.7e-106 387.9 235 78.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.7e-105 386.3 232 79.3
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.2e-105 386.0 233 79.4
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.1e-104 383.6 229 78.6
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 3.1e-104 382.1 232 76.7
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.6e-103 379.8 229 79.0
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 2.9e-102 375.6 228 77.2
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 6.5e-102 374.4 250 74.0
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 8.8e-99 364.0 236 74.6
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.6e-98 362.5 236 74.2
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 2.8e-97 359.0 221 75.6
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.8e-96 356.3 215 77.2
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.5e-95 352.1 222 73.9
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.0e-94 350.5 219 78.1
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.3e-94 349.4 234 72.2
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.6e-92 342.0 224 70.5
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 6.8e-91 337.8 209 74.2
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 4.4e-90 335.1 182 86.8
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 3.7e-89 332.0 183 84.2
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 4.1e-88 328.6 177 85.9
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.2e-87 327.0 222 68.9
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.2e-87 327.0 222 68.9
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 5.9e-87 324.7 224 68.3
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 7.3e-85 317.8 219 67.6
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 7.3e-85 317.8 222 64.9
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 2.7e-79 299.3 247 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.1e-76 289.7 219 60.7
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 1.9e-64 250.0 230 53.9
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 6.6e-54 214.9 221 47.1
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 3.4e-50 202.6 226 45.1
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 2.1e-44 183.3 221 43.0
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.4e-35 154.1 90 76.7
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 7.1e-32 141.7 82 81.7
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.5e-29 134.0 89 74.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-22 111.3 83 66.3
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.2e-18 97.8 68 67.6
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 3.0e-14 83.2 68 60.3
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 5.7e-13 79.0 48 70.8
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 1.3e-12 77.8 47 72.3
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.1e-11 74.7 47 70.2
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.0e-06 58.2 42 57.1


User provided reference genes

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