Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 7.7e-142 507.3 285 100.0
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 3.0e-61 239.6 234 65.0
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.5e-52 209.9 210 63.8
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 5.3e-50 202.2 230 60.0
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.2e-49 201.1 263 60.1
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 1.0e-48 198.0 249 59.4
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 7.9e-46 188.3 224 59.4
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 9.4e-39 164.9 256 50.8
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 7.9e-38 161.8 233 52.4
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 5.1e-37 159.1 244 45.5
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.3e-35 154.5 244 53.3
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 4.8e-35 152.5 247 48.2
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 6.3e-35 152.1 222 47.3
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.4e-34 151.0 248 44.0
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 3.1e-34 149.8 238 49.6
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.3e-34 149.1 245 46.5
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 6.9e-34 148.7 241 47.3
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 1.3e-32 144.4 225 51.6
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.7e-32 144.1 228 49.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 2.2e-32 143.7 243 45.3
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.9e-32 143.3 238 48.7
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 3.8e-32 142.9 225 44.4
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 1.4e-31 141.0 235 45.5
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.5e-31 140.2 246 44.3
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 3.2e-31 139.8 245 42.9
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 5.5e-31 139.0 219 53.4
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 3.6e-30 136.3 243 43.2
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 7.9e-30 135.2 234 44.9
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 3.9e-29 132.9 245 46.5
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 3.9e-29 132.9 245 42.9
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 6.7e-29 132.1 194 46.4
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 1.1e-28 131.3 245 41.6
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.5e-28 131.0 247 46.6
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 2.6e-28 130.2 237 44.7
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 3.3e-28 129.8 243 42.8
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 2.2e-27 127.1 245 40.8
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 2.2e-27 127.1 195 50.3
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.1e-26 124.8 231 42.0
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.8e-26 124.0 260 43.8
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 7.0e-26 122.1 229 40.2
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 7.0e-26 122.1 232 40.5
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 9.1e-26 121.7 184 52.7
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.5e-25 120.9 225 46.7
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 4.5e-25 119.4 238 46.6
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.2e-24 117.1 256 41.4
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 8.5e-24 115.2 244 45.5
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 3.2e-23 113.2 239 41.8
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 5.5e-23 112.5 226 43.8
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.2e-22 111.3 245 42.4
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.2e-22 111.3 232 38.8
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.1e-22 110.5 219 44.7
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 3.6e-22 109.8 238 41.2
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 6.1e-22 109.0 176 48.9
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 8.0e-22 108.6 234 41.0
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.4e-21 107.8 222 43.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 2.3e-21 107.1 224 38.4
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 2.3e-21 107.1 224 38.4
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 2.3e-21 107.1 224 38.4
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 3.0e-21 106.7 239 41.4
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 3.9e-21 106.3 224 38.4
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-20 104.8 224 37.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.5e-20 104.4 246 44.3
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 2.0e-20 104.0 262 38.5
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 3.3e-20 103.2 226 41.6
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 4.4e-20 102.8 238 37.8
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 5.7e-20 102.4 235 41.7
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.3e-19 101.3 222 39.6
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 1.7e-19 100.9 233 36.9
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 2.2e-19 100.5 241 40.2
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 8.2e-19 98.6 223 43.9
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.1e-18 98.2 222 39.6
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 7.0e-18 95.5 224 38.4
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 7.0e-18 95.5 227 41.4
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 9.1e-18 95.1 242 40.9
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 9.1e-18 95.1 179 42.5
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 2.6e-17 93.6 231 47.6
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 7.7e-17 92.0 254 37.4
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 2.9e-16 90.1 240 41.7
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.9e-15 87.4 229 36.2
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 3.2e-15 86.7 223 35.9
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 5.5e-15 85.9 240 39.6
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.2e-14 84.7 220 37.3
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 1.6e-14 84.3 209 36.4
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 1.6e-14 84.3 114 66.7
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 8.0e-14 82.0 194 45.4
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.4e-13 81.3 249 38.2
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 1.8e-13 80.9 209 40.2
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.8e-13 80.9 244 39.8
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 5.7e-12 75.9 175 39.4
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 7.5e-12 75.5 209 39.2
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 7.5e-12 75.5 89 51.7
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 1.6e-09 67.8 201 38.3
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 1.1e-07 61.6 201 36.3
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.1e-07 61.6 122 36.9


User provided reference genes

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