Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037635 Camellia sinensis var. sinensis HOM05D002551 ORTHO05D043303 3.5e-29 131.0 67 100.0
CSS0000514 Camellia sinensis var. sinensis HOM05D002551 ORTHO05D043303 9.0e-25 116.3 67 91.0
Dinv34780 Davidia involucrata HOM05D002551 ORTHO05D002832 7.4e-11 70.1 48 68.8
Migut.O00476 Erythranthe guttata HOM05D002551 ORTHO05D002832 1.6e-10 68.9 52 65.4
Rhsim01G0273000 Rhododendron simsii HOM05D002551 ORTHO05D002832 3.7e-10 67.8 63 61.9
Migut.N02035 Erythranthe guttata HOM05D002551 ORTHO05D002832 6.2e-10 67.0 52 63.5
vmacro14908 Vaccinium macrocarpon HOM05D002551 ORTHO05D002832 1.8e-09 65.5 49 65.3
SGA_v2.0_scaffold81G26035 Striga asiatica HOM05D002551 ORTHO05D002832 6.9e-09 63.5 52 59.6
AUR62028591 Chenopodium quinoa HOM05D002551 ORTHO05D002832 1.2e-08 62.8 49 61.2
Prupe.8G237500 Prunus persica HOM05D002551 ORTHO05D002832 1.2e-08 62.8 60 51.7
Actinidia21130 Actinidia chinensis HOM05D002551 ORTHO05D002832 2.0e-08 62.0 64 53.1
Actinidia24912 Actinidia chinensis HOM05D002551 ORTHO05D002832 3.4e-08 61.2 50 62.0
AUR62032318 Chenopodium quinoa HOM05D002551 ORTHO05D002832 4.5e-08 60.8 49 59.2
PGR004G1796 Punica granatum HOM05D002551 ORTHO05D002832 5.8e-08 60.5 53 54.7
CiPaw.08G107900 Carya illinoinensis HOM05D002551 ORTHO05D002832 1.7e-07 58.9 61 49.2
TAR362G0951 Trochodendron aralioides HOM05D002551 ORTHO05D002832 1.7e-07 58.9 51 49.0
Dinv32904 Davidia involucrata HOM05D002551 ORTHO05D002832 3.8e-07 57.8 50 58.0
CANSAT25G1299 Cannabis sativa HOM05D002551 ORTHO05D002832 4.9e-07 57.4 65 52.3
PSO210G0706 Papaver somniferum HOM05D002551 ORTHO05D002832 4.9e-07 57.4 50 50.0
Peaxi162Scf00230g00127 Petunia axillaris HOM05D002551 ORTHO05D002832 4.9e-07 57.4 43 58.1
CsaV3_7G027740 Cucumis sativus L. HOM05D002551 ORTHO05D002832 6.5e-07 57.0 54 51.9
Nitab4.5_0001729g0060 Nicotiana tabacum HOM05D002551 ORTHO05D002832 6.5e-07 57.0 65 50.8
PSO761G0632 Papaver somniferum HOM05D002551 ORTHO05D002832 6.5e-07 57.0 50 50.0
PSO832G4341 Papaver somniferum HOM05D002551 ORTHO05D002832 6.5e-07 57.0 49 53.1
Cfa006172 Carpinus fangiana HOM05D002551 ORTHO05D002832 1.1e-06 56.2 52 53.8
Haze_04679 Corylus avellana HOM05D002551 ORTHO05D002832 1.1e-06 56.2 52 53.8
Eucgr.D01140 Eucalyptus grandis HOM05D002551 ORTHO05D002832 1.4e-06 55.8 56 50.0
MD03G1261200 Malus domestica HOM05D002551 ORTHO05D002832 1.4e-06 55.8 60 48.3
Lj9C529T11 Lonicera japonica HOM05D002551 ORTHO05D002832 2.5e-06 55.1 50 54.0
EL10Ac5g10531 Beta vulgaris HOM05D002551 ORTHO05D002832 4.2e-06 54.3 53 54.7
FAN15G1237 Fragaria x ananassa HOM05D002551 ORTHO05D002832 5.5e-06 53.9 48 50.0
GSVIVG01001185001 Vitis vinifera HOM05D002551 ORTHO05D002832 5.5e-06 53.9 47 57.4
ClCG09G007260 Citrullus lanatus HOM05D002551 ORTHO05D002832 7.1e-06 53.5 53 50.9
MELO3C015789.2 Cucumis melo HOM05D002551 ORTHO05D002832 7.1e-06 53.5 50 52.0
FAN20G1127 Fragaria x ananassa HOM05D002551 ORTHO05D002832 9.3e-06 53.1 48 50.0
Gohir.D12G003500 Gossypium hirsutum HOM05D002551 ORTHO05D002832 9.3e-06 53.1 52 50.0
Gorai.008G003300 Gossypium raimondii HOM05D002551 ORTHO05D002832 9.3e-06 53.1 52 50.0
PSO210G4289 Papaver somniferum HOM05D002551 ORTHO05D002832 9.3e-06 53.1 59 45.8
PSO761G0488 Papaver somniferum HOM05D002551 ORTHO05D002832 9.3e-06 53.1 59 45.8
Potri.005G212333 Populus trichocarpa HOM05D002551 ORTHO05D002832 9.3e-06 53.1 46 50.0


User provided reference genes

Program Settings