Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037613 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 9.1e-101 370.2 176 100.0
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.9e-40 167.5 258 41.9
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 9.9e-39 164.1 176 51.7
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-37 160.2 252 38.9
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-34 148.7 258 39.5
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-30 135.2 179 40.8
CSS0004115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-28 130.2 206 39.8
CSS0011592 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.8e-28 127.9 176 44.9
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.7e-27 124.4 169 46.2
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-25 119.8 184 39.7
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 2.8e-25 119.4 179 41.9
CSS0016147 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 2.6e-23 112.8 163 44.8
CSS0000411 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 3.8e-22 109.0 160 40.0
CSS0013093 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 3.8e-22 109.0 160 40.0
CSS0033917 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.0e-20 101.7 165 41.8
CSS0043775 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.0e-20 101.7 165 41.8
CSS0020651 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.1e-19 98.6 155 45.2
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-19 98.2 186 33.3
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-18 97.4 186 33.3
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-18 97.1 185 33.5
CSS0045565 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D000004 3.3e-18 95.9 140 42.1
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 4.3e-18 95.5 185 34.6
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 7.3e-18 94.7 187 34.8
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-18 94.7 186 32.8
QL02p038629 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-18 94.4 191 34.0
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-18 94.4 187 33.7
CSS0002910 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.3e-17 94.0 127 46.5
CSS0005323 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.6e-17 93.6 127 46.5
CSS0018127 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.6e-17 93.6 127 46.5
CSS0046313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-17 93.2 183 37.7
CSS0043164 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-17 92.0 83 53.0
CSS0002327 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.4e-16 90.5 109 49.5
QL07p024662 Quercus lobata HOM05D000003 ORTHO05D013261 2.4e-16 89.7 187 33.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 2.4e-16 89.7 186 30.6
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 3.1e-16 89.4 183 35.5
CSS0021346 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-16 88.6 183 36.1
CSS0026455 Camellia sinensis var. sinensis HOM05D002503 ORTHO05D002810 5.3e-16 88.6 90 47.8
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 9.0e-16 87.8 186 31.2
CSS0008261 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-15 86.7 94 48.9
CSS0018069 Camellia sinensis var. sinensis HOM05D019333 ORTHO05D000004 3.4e-15 85.9 93 54.8
QL03p020243 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-15 85.5 159 32.1
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.9e-15 84.3 132 40.2
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-14 84.0 186 30.1
QL10p033496 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-14 84.0 186 30.1
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 2.2e-14 83.2 172 30.8
QL10p019376 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-14 82.8 177 32.2
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-14 82.8 185 30.3
QL06p022241 Quercus lobata HOM05D000200 ORTHO05D000262 3.8e-14 82.4 153 35.9
CSS0036239 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-14 82.0 63 60.3
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-14 82.0 186 32.3
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-14 82.0 186 33.3
QL06p005440 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-14 81.6 186 28.5
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-14 81.6 187 31.6
QL03p036039 Quercus lobata HOM05D000331 ORTHO05D000732 1.4e-13 80.5 151 33.1
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.4e-13 80.5 177 28.8
QL05p000220 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-13 80.1 184 30.4
QL05p033135 Quercus lobata HOM05D000840 ORTHO05D000670 1.9e-13 80.1 160 33.1
QL05p087707 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-13 79.7 176 31.2
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-13 79.7 184 31.0
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 3.2e-13 79.3 182 30.8
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 9.3e-13 77.8 183 30.1
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 1.6e-12 77.0 157 33.8
QL05p027656 Quercus lobata HOM05D005108 ORTHO05D006171 2.1e-12 76.6 158 33.5
QL08p028067 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-12 76.6 184 31.0
QL06p031608 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-12 76.3 184 28.8
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 2.7e-12 76.3 160 31.2
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 4.6e-12 75.5 183 29.5
QL02p067529 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-12 75.5 189 29.1
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 4.6e-12 75.5 165 31.5
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 4.6e-12 75.5 185 29.2
GSVIVG01004123001 Vitis vinifera HOM05D000003 ORTHO05D000004 4.6e-12 75.5 201 28.9
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.0e-12 75.1 164 30.5
QL11p018593 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-12 75.1 161 29.8
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 7.9e-12 74.7 187 29.4
QL07p031183 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-12 74.7 171 35.1
MBI05_g11580_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-11 73.9 174 31.0
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.0e-11 72.8 184 28.3
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 3.0e-11 72.8 184 29.9
QL01p009880 Quercus lobata HOM05D000230 ORTHO05D000176 3.0e-11 72.8 187 29.4
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 3.0e-11 72.8 176 30.7
QL11p001878 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-11 72.0 177 28.8
QL03p029909 Quercus lobata HOM05D001871 ORTHO05D002022 6.7e-11 71.6 151 31.1
QL01p019206 Quercus lobata HOM05D000003 ORTHO05D000004 8.7e-11 71.2 172 32.6
MBI06_g15030_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-10 70.9 161 33.5
Oeu051474.1 Olea europaea HOM05D000003 ORTHO05D000004 1.1e-10 70.9 169 30.2
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 1.1e-10 70.9 158 29.1
QL05p026285 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-10 70.9 116 36.2
QL01p030508 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 70.5 175 29.1
QL04p042639 Quercus lobata HOM05D004809 ORTHO05D006732 1.5e-10 70.5 144 34.0
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 1.5e-10 70.5 183 30.1
QL05p019557 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 70.5 182 33.5
QL93p0118_0006 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 70.5 184 26.6
QL05p066386 Quercus lobata HOM05D000064 ORTHO05D001902 1.9e-10 70.1 172 28.5
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 1.9e-10 70.1 175 28.0
QL07p018306 Quercus lobata HOM05D001721 ORTHO05D001804 1.9e-10 70.1 133 33.1
QL07p023909 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-10 70.1 184 26.6
CSS0026644 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-10 69.7 143 37.1
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-10 69.3 142 32.4
QL02p052266 Quercus lobata HOM05D000442 ORTHO05D001979 7.4e-10 68.2 145 30.3
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 7.4e-10 68.2 66 48.5
Cpa.g.sc71.29 Carica papaya HOM05D000003 ORTHO05D000004 9.6e-10 67.8 181 32.0
QL02p084961 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-10 67.8 166 31.3
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 9.6e-10 67.8 157 28.7
QL11p009748 Quercus lobata HOM05D005327 ORTHO05D000004 1.3e-09 67.4 162 32.1
QL04p090358 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-09 67.0 162 32.7
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-09 66.6 181 28.2
CSS0027538 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 2.1e-09 66.6 83 50.6
QL07p047387 Quercus lobata HOM05D002028 ORTHO05D002474 2.1e-09 66.6 172 31.4
Hund09829 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.8e-09 66.2 190 30.0
Oeu001026.1 Olea europaea HOM05D000003 ORTHO05D000004 3.7e-09 65.9 183 28.4
QL06p011649 Quercus lobata HOM05D002853 ORTHO05D003030 3.7e-09 65.9 69 50.7
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.8e-09 65.5 195 28.2
QL02p102686 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-09 65.5 164 34.8
Hund12693 Selenicereus undatus HOM05D001165 ORTHO05D000004 6.2e-09 65.1 190 27.4
QL04p073898 Quercus lobata HOM05D002312 ORTHO05D007981 8.1e-09 64.7 67 47.8
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 8.1e-09 64.7 189 28.6
Cpa.g.sc272.4 Carica papaya HOM05D000003 ORTHO05D000004 1.1e-08 64.3 178 30.3
QL05p050865 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-08 64.3 131 30.5
QL08p043628 Quercus lobata HOM05D000115 ORTHO05D005317 1.4e-08 63.9 70 50.0
QL10p023951 Quercus lobata HOM05D003769 ORTHO05D004521 1.4e-08 63.9 67 50.7
Aqoxy4G00589 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-08 63.5 183 28.4
CSS0036199 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D002201 1.8e-08 63.5 94 43.6
QL04p017759 Quercus lobata HOM05D003550 ORTHO05D004336 1.8e-08 63.5 67 49.3
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-08 63.5 189 27.5
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-08 63.5 189 27.5
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.8e-08 63.5 186 28.0
Aqoxy6G02329 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-08 63.2 179 27.4
QL05p039589 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-08 63.2 67 47.8
Aqoxy5G03103 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.1e-08 62.8 181 31.5
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 3.1e-08 62.8 185 27.6
QL01p046128 Quercus lobata HOM05D004395 ORTHO05D005234 3.1e-08 62.8 67 47.8
QL03p046607 Quercus lobata HOM05D003083 ORTHO05D003466 3.1e-08 62.8 67 50.7
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-08 62.4 159 30.2
QL07p010213 Quercus lobata HOM05D002614 ORTHO05D000004 4.0e-08 62.4 66 47.0
Hund22310 Selenicereus undatus HOM05D000003 ORTHO05D000004 4.0e-08 62.4 188 29.3
PSO782G4061 Papaver somniferum HOM05D000003 ORTHO05D000004 5.3e-08 62.0 188 26.6
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 5.3e-08 62.0 67 50.7
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 5.3e-08 62.0 154 26.6
Aqoxy3G01395 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.9e-08 61.6 155 29.0
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 6.9e-08 61.6 143 31.5
QL07p025072 Quercus lobata HOM05D000115 ORTHO05D000004 9.0e-08 61.2 173 27.7
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 1.2e-07 60.8 67 47.8
QL10p000304 Quercus lobata HOM05D006645 ORTHO05D008129 1.2e-07 60.8 63 50.8
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-07 60.1 184 29.3
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 2.6e-07 59.7 157 30.6
QL02p038126 Quercus lobata HOM05D000003 ORTHO05D002480 2.6e-07 59.7 122 32.8
QL10p007484 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-07 59.7 67 44.8
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.4e-07 59.3 146 30.1
QL06p051793 Quercus lobata HOM05D002612 ORTHO05D002859 3.4e-07 59.3 63 50.8
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 3.4e-07 59.3 156 26.9
Aqoxy2G01919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.5e-07 58.9 183 26.2
QL05p050638 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-07 58.9 158 27.2
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 4.5e-07 58.9 72 44.4
QL09p042482 Quercus lobata HOM05D003081 ORTHO05D003627 4.5e-07 58.9 149 30.2
QL02p037654 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-07 58.5 69 44.9
Cpa.g.sc140.5 Carica papaya HOM05D000003 ORTHO05D000004 7.6e-07 58.2 163 31.9
QL10p027521 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-07 58.2 69 43.5
QL10p049160 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-07 58.2 88 33.0
PGSC0003DMG400009750 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.6e-07 58.2 151 30.5
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 9.9e-07 57.8 55 52.7
QL11p007130 Quercus lobata HOM05D003083 ORTHO05D003466 9.9e-07 57.8 66 45.5
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 9.9e-07 57.8 89 39.3
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-06 57.4 71 40.8
QL02p025639 Quercus lobata HOM05D001548 ORTHO05D003901 1.3e-06 57.4 60 43.3
QL09p026662 Quercus lobata HOM05D000917 ORTHO05D000764 1.3e-06 57.4 145 29.7
QL12p000462 Quercus lobata HOM05D001165 ORTHO05D001347 1.3e-06 57.4 160 26.9
Oeu045954.1 Olea europaea HOM05D000003 ORTHO05D000004 1.7e-06 57.0 146 29.5
GSVIVG01032339001 Vitis vinifera HOM05D000003 ORTHO05D000004 1.7e-06 57.0 101 35.6
Cpa.g.sc13.121 Carica papaya HOM05D000677 ORTHO05D000727 2.2e-06 56.6 118 31.4
PSO423G0233 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-06 56.6 183 26.8
QL03p051323 Quercus lobata HOM05D000144 ORTHO05D000004 2.2e-06 56.6 104 37.5
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 2.2e-06 56.6 65 47.7
QL07p017571 Quercus lobata HOM05D002168 ORTHO05D002277 2.2e-06 56.6 138 30.4
QL10p052572 Quercus lobata HOM05D004685 ORTHO05D005412 2.2e-06 56.6 66 43.9
QL11p016596 Quercus lobata HOM05D001928 ORTHO05D001987 2.2e-06 56.6 64 43.8
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 2.2e-06 56.6 141 32.6
Cpa.g.sc73.80 Carica papaya HOM05D000003 ORTHO05D000004 2.9e-06 56.2 69 44.9
CSS0019869 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 3.8e-06 55.8 76 46.1
Cpa.g.sc1512.2 Carica papaya HOM05D000003 ORTHO05D000004 3.8e-06 55.8 69 44.9
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.8e-06 55.8 189 27.0
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 3.8e-06 55.8 66 42.4
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 55.5 107 33.6
QL05p083382 Quercus lobata HOM05D001909 ORTHO05D007079 4.9e-06 55.5 66 43.9
QL06p034911 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-06 55.5 67 43.3
QL05p035325 Quercus lobata HOM05D000003 ORTHO05D012891 6.4e-06 55.1 75 41.3
QL10p041044 Quercus lobata HOM05D000189 ORTHO05D004078 6.4e-06 55.1 129 31.8
CSS0033927 Camellia sinensis var. sinensis HOM05D001352 ORTHO05D001354 8.4e-06 54.7 88 40.9
Cpa.g.sc195.3 Carica papaya HOM05D000003 ORTHO05D000004 8.4e-06 54.7 169 27.8
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 8.4e-06 54.7 67 43.3
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 8.4e-06 54.7 58 43.1


User provided reference genes

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