Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.7e-39 165.6 86 100.0
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.7e-39 165.6 86 100.0
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 1.1e-38 162.9 86 97.7
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 3.1e-38 161.4 83 100.0
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 5.3e-38 160.6 86 96.5
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 7.0e-38 160.2 86 95.3
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 95.3
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.2e-37 159.5 86 95.3
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.2e-37 159.5 86 95.3
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.2e-37 159.5 83 97.6
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.5e-37 159.1 84 96.4
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 2.0e-37 158.7 83 97.6
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.0e-37 158.7 86 95.3
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.0e-37 158.7 86 95.3
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 2.0e-37 158.7 86 94.2
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 2.6e-37 158.3 83 97.6
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 2.6e-37 158.3 83 97.6
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 97.6
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 5.9e-37 157.1 86 93.0
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 5.9e-37 157.1 83 96.4
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 7.7e-37 156.8 83 97.6
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 7.7e-37 156.8 83 96.4
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 7.7e-37 156.8 86 94.2
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 7.7e-37 156.8 83 97.6
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.0e-36 156.4 86 93.0
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 1.0e-36 156.4 83 96.4
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.3e-36 156.0 83 96.4
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.3e-36 156.0 83 96.4
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 94.2
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 1.3e-36 156.0 84 94.0
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 91.9
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.7e-36 155.6 86 93.0
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.7e-36 155.6 83 96.4
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.7e-36 155.6 86 93.0
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 2.2e-36 155.2 83 96.4
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 2.2e-36 155.2 83 96.4
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.9e-36 154.8 83 95.2
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 2.9e-36 154.8 86 91.9
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 5.0e-36 154.1 83 92.8
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 5.0e-36 154.1 86 91.9
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 1.1e-35 152.9 86 91.9
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 1.4e-35 152.5 83 91.6
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.4e-35 152.5 83 92.8
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 1.9e-35 152.1 83 94.0
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 91.6
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 3.2e-35 151.4 88 89.8
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.2e-35 151.4 86 88.4
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 5.5e-35 150.6 83 92.8
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 9.4e-35 149.8 83 94.0
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 1.2e-34 149.4 79 94.9
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 3.6e-34 147.9 85 90.6
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 3.6e-34 147.9 85 90.6
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 6.1e-34 147.1 83 88.0
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 1.0e-33 146.4 84 90.5
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 1.0e-33 146.4 84 90.5
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 1.0e-33 146.4 84 90.5
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 1.0e-33 146.4 84 90.5
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 1.0e-33 146.4 84 90.5
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 4.4e-32 141.0 84 83.3
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 1.3e-31 139.4 84 82.1
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 1.7e-31 139.0 92 78.3
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 2.2e-31 138.7 86 81.4
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.1e-30 136.3 72 95.8
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 5.3e-30 134.0 73 94.5
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 9.1e-30 133.3 78 87.2
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.2e-29 132.9 72 93.1
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 2.2e-28 128.6 73 91.8
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 2.2e-28 128.6 86 77.9
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 2.2e-28 128.6 86 77.9
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 2.2e-28 128.6 86 77.9
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 3.8e-28 127.9 83 79.5
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 5.0e-28 127.5 83 83.1
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 5.0e-28 127.5 84 78.6
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 8.5e-28 126.7 86 77.9
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 1.1e-27 126.3 73 83.6
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 1.5e-27 125.9 82 80.5
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 1.5e-27 125.9 82 80.5
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 4.2e-27 124.4 75 81.3
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.6e-26 122.5 86 75.6
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 2.7e-26 121.7 86 74.4
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 3.0e-25 118.2 90 70.0
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 8.5e-20 100.1 71 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 1.5e-19 99.4 76 61.8
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 1.9e-19 99.0 72 66.7
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 4.2e-19 97.8 86 65.1
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.3e-17 92.0 48 97.9
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 8.8e-17 90.1 64 75.0
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 9.8e-16 86.7 69 56.5
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 1.3e-15 86.3 44 93.2
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 1.6e-13 79.3 46 80.4
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 2.0e-13 79.0 70 61.4
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 5.2e-09 64.3 64 42.2
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 6.3e-07 57.4 33 81.8


User provided reference genes

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