Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037560 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.9e-108 394.8 198 100.0
CSS0007927 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 8.3e-18 94.7 120 42.5
CSS0046143 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.1e-17 92.8 120 42.5
Nitab4.5_0000149g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.5e-11 71.6 181 31.5
Dinv16568 Davidia involucrata HOM05D001046 ORTHO05D000221 9.8e-11 71.2 113 42.5
Lsat_1_v5_gn_1_81201 Lactuca sativa HOM05D000312 ORTHO05D000221 3.7e-10 69.3 120 38.3
Lsat_1_v5_gn_1_81501 Lactuca sativa HOM05D000312 ORTHO05D000221 6.3e-10 68.6 118 37.3
Dinv16566 Davidia involucrata HOM05D000312 ORTHO05D000221 1.1e-09 67.8 118 39.8
Peaxi162Scf00698g00124 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-09 67.4 128 38.3
Peaxi162Scf00413g00614 Petunia axillaris HOM05D000312 ORTHO05D000221 1.8e-09 67.0 104 40.4
Lsat_1_v5_gn_1_81521 Lactuca sativa HOM05D000312 ORTHO05D000221 3.1e-09 66.2 120 36.7
Rhsim09G0116300 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.1e-09 66.2 116 35.3
Rhsim09G0116900 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.1e-09 66.2 116 35.3
Peaxi162Scf00121g00013 Petunia axillaris HOM05D000312 ORTHO05D000221 4.1e-09 65.9 111 38.7
Peaxi162Scf00635g00718 Petunia axillaris HOM05D000312 ORTHO05D000221 5.4e-09 65.5 112 39.3
Dinv15561 Davidia involucrata HOM05D001046 ORTHO05D002934 7.0e-09 65.1 116 37.1
Dinv15562 Davidia involucrata HOM05D000312 ORTHO05D000221 7.0e-09 65.1 115 40.0
CSS0044785 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 9.2e-09 64.7 92 42.4
Nitab4.5_0012833g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 9.2e-09 64.7 116 37.9
Cc11_g11160 Coffea canephora HOM05D000312 ORTHO05D000221 1.2e-08 64.3 123 33.3
Peaxi162Scf00015g00635 Petunia axillaris HOM05D000312 ORTHO05D000221 1.2e-08 64.3 114 36.0
Sopen11g006010 Solanum pennellii HOM05D000312 ORTHO05D000221 2.0e-08 63.5 147 34.0
CAN.G1217.12 Capsicum annuum HOM05D000312 ORTHO05D000221 2.7e-08 63.2 121 35.5
Lsat_1_v5_gn_1_81361 Lactuca sativa HOM05D000312 ORTHO05D000221 2.7e-08 63.2 113 37.2
Lsat_1_v5_gn_1_81541 Lactuca sativa HOM05D000312 ORTHO05D000221 4.5e-08 62.4 113 35.4
Peaxi162Scf00053g00810 Petunia axillaris HOM05D000312 ORTHO05D000221 4.5e-08 62.4 119 32.8
Prupe.8G148700 Prunus persica HOM05D000312 ORTHO05D000221 5.9e-08 62.0 134 32.8
Glyma.02G126900 Glycine max HOM05D000312 ORTHO05D000221 7.7e-08 61.6 109 36.7
Nitab4.5_0000149g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.7e-08 61.6 116 32.8
Nitab4.5_0000149g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.7e-08 61.6 113 37.2
Nitab4.5_0000913g0170 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.7e-08 61.6 116 35.3
Peaxi162Scf00566g00715 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-08 61.6 117 33.3
HanXRQChr16g0528011 Helianthus annuus HOM05D000312 ORTHO05D000221 1.0e-07 61.2 117 37.6
Nitab4.5_0000149g0080 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.0e-07 61.2 104 40.4
Nitab4.5_0005211g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.3e-07 60.8 113 36.3
Rhsim09G0117400 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.3e-07 60.8 108 35.2
PGSC0003DMG400015672 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.3e-07 60.8 109 39.4
Dinv34662 Davidia involucrata HOM05D000312 ORTHO05D000221 1.7e-07 60.5 109 37.6
HanXRQChr16g0528091 Helianthus annuus HOM05D000312 ORTHO05D000221 1.7e-07 60.5 111 36.9
Nitab4.5_0000032g0380 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-07 60.5 112 34.8
Nitab4.5_0004294g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-07 60.5 116 37.1
Nitab4.5_0004908g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-07 60.5 112 33.9
Sc04g0007140 Simmondsia chinensis HOM05D000312 ORTHO05D000221 1.7e-07 60.5 110 38.2
Peaxi162Scf00015g10234 Petunia axillaris HOM05D000312 ORTHO05D000221 2.3e-07 60.1 110 37.3
Peaxi162Scf00369g00089 Petunia axillaris HOM05D000312 ORTHO05D000221 3.8e-07 59.3 120 33.3
Solyc11g011230.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 3.8e-07 59.3 147 32.7
CAN.G222.8 Capsicum annuum HOM05D000312 ORTHO05D000221 5.0e-07 58.9 147 32.7
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 5.0e-07 58.9 117 38.5
SGA_v2.0_scaffold24G10274 Striga asiatica HOM05D000312 ORTHO05D000221 5.0e-07 58.9 113 34.5
Glyma.02G127100 Glycine max HOM05D000312 ORTHO05D000221 6.6e-07 58.5 109 35.8
Nitab4.5_0012426g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.6e-07 58.5 117 40.2
Peaxi162Scf00820g00042 Petunia axillaris HOM05D000312 ORTHO05D000221 6.6e-07 58.5 110 37.3
Peaxi162Scf00003g00813 Petunia axillaris HOM05D000312 ORTHO05D000221 8.6e-07 58.2 109 33.9
RcHm_v2.0_Chr6g0252081 Rosa chinensis HOM05D000312 ORTHO05D000221 8.6e-07 58.2 126 34.9
TAR629G2162 Trochodendron aralioides HOM05D000312 ORTHO05D000221 8.6e-07 58.2 139 33.8
Hund25129 Selenicereus undatus HOM05D000312 ORTHO05D000221 1.1e-06 57.8 110 34.5
Peaxi162Scf00015g02411 Petunia axillaris HOM05D000312 ORTHO05D000221 1.5e-06 57.4 110 36.4
ECA248G3291 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.9e-06 57.0 113 34.5
Nitab4.5_0004294g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.9e-06 57.0 116 34.5
PGSC0003DMG400013519 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.9e-06 57.0 108 35.2
Lsat_1_v5_gn_1_80360 Lactuca sativa HOM05D000312 ORTHO05D000221 2.5e-06 56.6 113 33.6
Peaxi162Scf00121g00222 Petunia axillaris HOM05D000312 ORTHO05D000221 2.5e-06 56.6 117 37.6
Prupe.8G149000 Prunus persica HOM05D000312 ORTHO05D000221 2.5e-06 56.6 137 34.3
Solyc05g008470.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 2.5e-06 56.6 108 37.0
AUR62007797 Chenopodium quinoa HOM05D000312 ORTHO05D000221 3.3e-06 56.2 111 36.9
ECA170G0002 Erigeron canadensis HOM05D000312 ORTHO05D000221 3.3e-06 56.2 90 38.9
Peaxi162Scf00121g00023 Petunia axillaris HOM05D000312 ORTHO05D000221 3.3e-06 56.2 113 38.9
Sc04g0007120 Simmondsia chinensis HOM05D000312 ORTHO05D000221 3.3e-06 56.2 113 34.5
CAN.G1339.1 Capsicum annuum HOM05D000312 ORTHO05D000221 4.3e-06 55.8 110 37.3
ECA234G1420 Erigeron canadensis HOM05D000312 ORTHO05D000221 4.3e-06 55.8 113 32.7
Lsat_1_v5_gn_1_16301 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-06 55.8 110 36.4
HanXRQChr16g0528141 Helianthus annuus HOM05D000312 ORTHO05D000221 5.6e-06 55.5 81 43.2
Peaxi162Scf00026g00192 Petunia axillaris HOM05D000312 ORTHO05D000221 7.3e-06 55.1 118 37.3
Hund05798 Selenicereus undatus HOM05D000312 ORTHO05D000221 7.3e-06 55.1 108 33.3
Solyc04g025653.1 Solanum lycopersicum HOM05D000312 ORTHO05D000221 7.3e-06 55.1 113 34.5
Sopen04g013290 Solanum pennellii HOM05D000312 ORTHO05D000221 7.3e-06 55.1 118 31.4
AUR62007794 Chenopodium quinoa HOM05D000312 ORTHO05D000221 9.5e-06 54.7 149 30.9
Dinv15564 Davidia involucrata HOM05D000312 ORTHO05D000221 9.5e-06 54.7 115 36.5
HanXRQChr16g0528041 Helianthus annuus HOM05D000312 ORTHO05D000221 9.5e-06 54.7 68 45.6


User provided reference genes

Program Settings