Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037552 Camellia sinensis var. sinensis HOM05D002097 ORTHO05D017202 2.0e-63 246.5 229 100.0
CSS0007259 Camellia sinensis var. sinensis HOM05D002097 ORTHO05D002248 6.6e-27 125.2 72 93.1
Dinv14120 Davidia involucrata HOM05D002097 ORTHO05D002248 1.7e-14 84.0 71 66.2
Actinidia20520 Actinidia chinensis HOM05D002097 ORTHO05D002248 2.4e-13 80.1 68 63.2
Eucgr.I01450 Eucalyptus grandis HOM05D002097 ORTHO05D002248 2.4e-13 80.1 71 60.6
GSVIVG01023997001 Vitis vinifera HOM05D002097 ORTHO05D017202 3.5e-12 76.3 61 63.9
Cpa.g.sc20.102 Carica papaya HOM05D002097 ORTHO05D002248 4.6e-12 75.9 67 64.2
MD10G1126500 Malus domestica HOM05D002097 ORTHO05D002248 1.7e-11 73.9 70 60.0
Lj5C177G7 Lonicera japonica HOM05D002716 ORTHO05D003324 6.6e-11 72.0 80 55.0
FvH4_2g15540 Fragaria vesca HOM05D002097 ORTHO05D002248 8.7e-11 71.6 66 60.6
FAN27G2262 Fragaria x ananassa HOM05D000686 ORTHO05D002248 8.7e-11 71.6 66 60.6
FAN20G3080 Fragaria x ananassa HOM05D000686 ORTHO05D002248 1.1e-10 71.2 69 58.0
FAN15G0394 Fragaria x ananassa HOM05D002097 ORTHO05D002248 1.9e-10 70.5 69 58.0
Rhsim11G0193100 Rhododendron simsii HOM05D002097 ORTHO05D017202 1.9e-10 70.5 59 62.7
Cfa005274 Carpinus fangiana HOM05D002097 ORTHO05D002248 3.3e-10 69.7 69 58.0
MD05G1123800 Malus domestica HOM05D002097 ORTHO05D002248 7.3e-10 68.6 60 63.3
Nn5g30821 Nelumbo nucifera HOM05D002097 ORTHO05D002248 1.3e-09 67.8 68 52.9
Prupe.8G167800 Prunus persica HOM05D002097 ORTHO05D002248 1.3e-09 67.8 53 67.9
TAR381G0974 Trochodendron aralioides HOM05D002097 ORTHO05D002248 1.3e-09 67.8 71 54.9
CANSAT25G1049 Cannabis sativa HOM05D002097 ORTHO05D002248 3.6e-09 66.2 71 50.7
DCAR_003181 Daucus carota HOM05D002097 ORTHO05D002248 8.1e-09 65.1 71 53.5
Haze_27451 Corylus avellana HOM05D002097 ORTHO05D017202 1.1e-08 64.7 68 55.9
Ca_03303_v3 Cicer arietinum L. HOM05D002097 ORTHO05D002248 1.4e-08 64.3 72 54.2
Actinidia06136 Actinidia chinensis HOM05D002097 ORTHO05D017202 2.4e-08 63.5 73 52.1
Ciclev10027985m.g Citrus clementina HOM05D002097 ORTHO05D002248 3.1e-08 63.2 74 55.4
RcHm_v2.0_Chr6g0278711 Rosa chinensis HOM05D002097 ORTHO05D002248 4.0e-08 62.8 51 66.7
CiPaw.06G120700 Carya illinoinensis HOM05D002097 ORTHO05D002248 6.9e-08 62.0 72 54.2
ECA233G3575 Erigeron canadensis HOM05D002097 ORTHO05D002248 9.0e-08 61.6 71 54.9
FAN24G1581 Fragaria x ananassa HOM05D000686 ORTHO05D000512 9.0e-08 61.6 53 62.3
Gohir.A01G002100 Gossypium hirsutum HOM05D002097 ORTHO05D002248 9.0e-08 61.6 76 53.9
HanXRQChr12g0374631 Helianthus annuus HOM05D002097 ORTHO05D002248 9.0e-08 61.6 71 54.9
TAR625G0828 Trochodendron aralioides HOM05D002097 ORTHO05D002248 1.2e-07 61.2 71 47.9
Gohir.D01G001700 Gossypium hirsutum HOM05D002097 ORTHO05D002248 1.5e-07 60.8 76 53.9
Gorai.002G002300 Gossypium raimondii HOM05D002097 ORTHO05D002248 1.5e-07 60.8 76 53.9
Lsat_1_v5_gn_8_123101 Lactuca sativa HOM05D002716 ORTHO05D003324 4.4e-07 59.3 53 56.6
MELO3C013338.2 Cucumis melo HOM05D002097 ORTHO05D002248 5.8e-07 58.9 63 55.6
Gohir.D02G226900 Gossypium hirsutum HOM05D002097 ORTHO05D002248 5.8e-07 58.9 71 54.9
Thecc.02G057400 Theobroma cacao HOM05D002097 ORTHO05D002248 5.8e-07 58.9 45 62.2
Gorai.005G254800 Gossypium raimondii HOM05D002097 ORTHO05D002248 1.3e-06 57.8 91 44.0
Glyma.10G282400 Glycine max HOM05D002097 ORTHO05D002248 1.7e-06 57.4 71 53.5
Phvul.007G018500 Phaseolus vulgaris HOM05D002097 ORTHO05D002248 2.2e-06 57.0 92 42.4
Hund00016 Selenicereus undatus HOM05D002097 ORTHO05D002248 2.2e-06 57.0 71 49.3
QL11p051403 Quercus lobata HOM05D002097 ORTHO05D017202 3.8e-06 56.2 59 55.9
vmacro02285 Vaccinium macrocarpon HOM05D002097 ORTHO05D002248 6.4e-06 55.5 59 54.2
Sed0017736 Sechium edule HOM05D002097 ORTHO05D002248 8.4e-06 55.1 60 53.3


User provided reference genes

Program Settings