Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 5.1e-47 190.7 92 100.0
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.7e-32 141.7 98 73.5
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 3.0e-31 138.3 97 73.2
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 4.0e-31 137.9 98 72.4
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 8.8e-31 136.7 97 73.2
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 7.5e-30 133.7 98 71.4
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 7.5e-30 133.7 98 71.4
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 9.7e-30 133.3 98 67.3
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.3e-29 132.9 98 70.4
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 1.3e-29 132.9 97 70.1
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 1.3e-29 132.9 98 68.4
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.7e-29 132.5 98 70.4
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 1.8e-28 129.0 97 68.0
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 1.8e-28 129.0 97 68.0
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 1.2e-27 126.3 97 67.0
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 1.7e-26 122.5 98 64.3
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 2.2e-26 122.1 98 65.3
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 5.0e-26 120.9 99 63.6
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 6.5e-26 120.6 97 63.9
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 1.5e-25 119.4 96 63.5
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 1.9e-25 119.0 101 65.3
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 1.9e-25 119.0 97 63.9
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.9e-25 119.0 98 63.3
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 1.9e-25 119.0 99 62.6
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 4.2e-25 117.9 95 61.1
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 7.2e-25 117.1 97 59.8
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 9.4e-25 116.7 100 64.0
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-24 116.3 85 69.4
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-24 116.3 85 69.4
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-24 116.3 85 69.4
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-24 116.3 85 69.4
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 1.6e-24 115.9 86 67.4
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.7e-24 115.2 96 60.4
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 4.7e-24 114.4 96 60.4
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 4.7e-24 114.4 96 61.5
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 1.0e-23 113.2 98 62.2
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 1.4e-23 112.8 98 61.2
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 1.8e-23 112.5 96 59.4
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 4.0e-23 111.3 96 58.3
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 5.2e-23 110.9 95 60.0
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 5.2e-23 110.9 85 62.4
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 5.2e-23 110.9 96 58.3
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 5.2e-23 110.9 101 62.4
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 5.2e-23 110.9 101 62.4
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 6.8e-23 110.5 96 58.3
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 6.8e-23 110.5 99 59.6
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 6.8e-23 110.5 96 58.3
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 8.8e-23 110.2 95 55.8
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 1.2e-22 109.8 95 55.8
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 1.5e-22 109.4 96 57.3
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 2.0e-22 109.0 96 57.3
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 2.6e-22 108.6 95 55.8
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.6e-22 108.6 95 55.8
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.6e-22 108.6 95 55.8
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 3.4e-22 108.2 97 57.7
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 5.7e-22 107.5 96 59.4
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 5.7e-22 107.5 83 66.3
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 7.5e-22 107.1 96 57.3
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 7.5e-22 107.1 99 62.6
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 7.5e-22 107.1 92 64.1
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 9.8e-22 106.7 85 65.9
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 1.3e-21 106.3 97 56.7
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.3e-21 106.3 98 61.2
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 1.7e-21 105.9 85 65.9
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.2e-21 105.5 85 65.9
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 3.7e-21 104.8 96 55.2
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 4.8e-21 104.4 97 56.7
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 4.8e-21 104.4 96 58.3
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 6.3e-21 104.0 97 57.7
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 6.3e-21 104.0 96 57.3
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 6.3e-21 104.0 94 55.3
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 6.3e-21 104.0 99 61.6
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 8.3e-21 103.6 96 53.1
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 8.3e-21 103.6 96 53.1
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 1.4e-20 102.8 98 59.2
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 1.4e-20 102.8 97 55.7
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 7.0e-20 100.5 98 57.1
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.2e-19 99.8 97 56.7
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.2e-19 99.8 97 55.7
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.6e-19 99.4 72 66.7
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 2.7e-19 98.6 87 55.2
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 7.7e-19 97.1 70 68.6
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 5.0e-18 94.4 96 52.1
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 8.5e-18 93.6 98 50.0
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 1.5e-17 92.8 94 57.4
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.9e-17 92.4 98 55.1
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 1.9e-17 92.4 78 57.7
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 2.5e-17 92.0 79 63.3
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 3.2e-17 91.7 98 49.0
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 3.2e-17 91.7 93 57.0
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 4.2e-17 91.3 83 60.2
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 7.2e-17 90.5 107 52.3
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 9.5e-17 90.1 94 55.3
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 9.5e-17 90.1 94 55.3
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.2e-16 89.7 98 53.1
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 1.2e-16 89.7 96 52.1
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 2.1e-16 89.0 95 54.7
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 2.8e-16 88.6 95 54.7
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 4.7e-16 87.8 100 53.0
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 8.0e-16 87.0 98 51.0
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.0e-15 86.7 93 49.5
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 1.0e-15 86.7 97 52.6
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 1.0e-15 86.7 99 50.5
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 1.4e-15 86.3 96 47.9
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 4.0e-15 84.7 84 57.1
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 6.8e-15 84.0 95 53.7
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 6.8e-15 84.0 95 53.7
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 2.6e-14 82.0 61 63.9
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 3.4e-14 81.6 86 48.8
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 4.4e-14 81.3 68 63.2
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 1.7e-13 79.3 101 46.5
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 1.7e-13 79.3 86 53.5
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 2.2e-13 79.0 59 64.4
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 3.7e-13 78.2 95 51.6
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 1.4e-12 76.3 79 54.4
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 2.4e-12 75.5 100 44.0
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 3.1e-12 75.1 100 45.0
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 9.2e-12 73.6 67 61.2
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.2e-11 73.2 86 45.3
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 2.0e-11 72.4 99 46.5
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 3.5e-11 71.6 103 44.7
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 1.7e-10 69.3 85 47.1
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 1.1e-09 66.6 87 49.4
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.5e-09 66.2 98 40.8
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 1.5e-09 66.2 55 61.8
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 1.9e-09 65.9 55 61.8
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 5.6e-09 64.3 86 41.9
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 1.4e-07 59.7 44 63.6
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 1.4e-07 59.7 44 63.6
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 6.8e-07 57.4 39 66.7
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 1.5e-06 56.2 45 60.0
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 2.6e-06 55.5 55 45.5


User provided reference genes

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