Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 9.1e-173 610.1 307 100.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 4.2e-162 574.7 298 97.3
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 3.0e-131 472.2 273 85.0
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 6.0e-116 421.4 287 74.9
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 5.8e-111 404.8 280 70.7
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 8.4e-110 401.0 273 71.1
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 1.4e-109 400.2 275 72.0
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 2.7e-108 396.0 270 73.0
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 2.7e-108 396.0 278 71.6
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 6.0e-108 394.8 280 71.1
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 7.8e-108 394.4 267 73.8
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.0e-107 394.0 282 68.8
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 5.1e-107 391.7 278 70.1
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.6e-106 388.3 292 68.2
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 9.6e-106 387.5 278 70.9
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 9.6e-106 387.5 274 70.1
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 1.2e-105 387.1 298 66.4
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.2e-105 387.1 276 69.6
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 1.6e-105 386.7 279 68.8
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.1e-105 386.3 292 68.5
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 2.8e-105 386.0 279 69.2
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 2.8e-105 386.0 276 69.6
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 4.7e-105 385.2 291 67.4
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 6.2e-105 384.8 292 65.8
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 8.1e-105 384.4 271 70.8
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 8.1e-105 384.4 295 66.1
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 1.1e-104 384.0 274 68.6
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.1e-104 384.0 272 69.9
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.4e-104 383.6 291 69.1
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 4.0e-104 382.1 288 67.0
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 5.2e-104 381.7 293 66.9
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.5e-103 380.2 270 70.4
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 1.3e-102 377.1 267 71.9
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 3.8e-102 375.6 282 64.5
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 4.9e-102 375.2 270 66.3
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 6.4e-102 374.8 282 66.7
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 1.4e-101 373.6 287 69.3
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.4e-101 373.6 277 68.2
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.4e-101 373.6 275 68.7
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 4.2e-101 372.1 283 68.9
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 5.4e-101 371.7 275 66.2
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 4.6e-100 368.6 272 66.2
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.0e-99 367.5 291 66.3
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 8.7e-99 364.4 272 65.8
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 4.3e-98 362.1 312 60.6
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 1.3e-97 360.5 275 65.5
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.1e-97 359.8 326 56.4
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 2.8e-97 359.4 236 74.2
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 3.6e-97 359.0 285 67.7
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 6.2e-97 358.2 325 57.8
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 8.1e-97 357.8 325 57.8
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.1e-96 357.5 290 61.7
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 9.0e-96 354.4 269 66.5
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 1.2e-95 354.0 268 65.3
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 3.4e-95 352.4 268 64.9
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 4.5e-95 352.1 257 68.5
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 1.7e-94 350.1 274 66.4
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 1.7e-94 350.1 269 63.9
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 3.8e-94 349.0 268 64.9
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 6.4e-94 348.2 267 64.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 4.2e-93 345.5 278 63.3
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.6e-92 343.6 271 63.1
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.3e-91 340.5 268 64.2
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 1.7e-91 340.1 273 61.5
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 5.1e-91 338.6 271 62.0
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.9e-90 336.7 266 61.3
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 2.5e-90 336.3 250 70.8
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 5.6e-90 335.1 273 59.3
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 8.1e-89 331.3 276 59.1
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 1.5e-87 327.0 299 55.9
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.5e-87 327.0 301 56.1
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.5e-87 327.0 210 75.2
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 3.4e-87 325.9 273 58.6
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 9.9e-87 324.3 280 58.6
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 6.4e-86 321.6 281 59.1
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 1.1e-85 320.9 281 58.7
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 7.1e-85 318.2 281 58.4
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 9.3e-85 317.8 290 57.9
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 3.9e-83 312.4 209 72.2
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.9e-83 312.4 261 62.1
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.5e-82 310.5 231 64.9
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.3e-81 307.4 218 67.0
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 1.2e-79 300.8 284 55.6
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 4.5e-79 298.9 230 63.0
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 1.4e-77 293.9 197 71.1
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 4.2e-77 292.4 209 64.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 2.3e-75 286.6 244 60.2
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 3.7e-73 279.3 246 56.9
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 4.1e-72 275.8 183 76.0
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 5.3e-72 275.4 234 57.7
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.6e-68 262.7 223 62.8
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 2.4e-64 250.0 221 55.7
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 2.9e-62 243.0 201 61.2
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 4.2e-61 239.2 222 58.1
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.9e-59 232.6 166 68.7
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 7.7e-55 218.4 163 66.3
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.3e-54 217.6 166 68.1
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 1.1e-53 214.5 209 55.5
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 6.1e-52 208.8 133 75.9
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 9.1e-48 194.9 161 60.9
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 1.0e-46 191.4 177 54.8
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.9e-46 189.9 141 69.5
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 1.6e-44 184.1 305 39.7
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 5.2e-43 179.1 239 46.9
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 9.4e-37 158.3 100 74.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 2.3e-35 153.7 130 57.7
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.2e-35 152.5 143 53.8
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 2.2e-33 147.1 102 69.6
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 5.4e-32 142.5 98 65.3
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 4.7e-28 129.4 98 63.3
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 1.0e-27 128.3 101 63.4
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.4e-27 127.9 104 57.7
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-27 127.5 97 58.8
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.3e-27 127.1 83 73.5
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 2.6e-26 123.6 121 56.2
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 3.8e-22 109.8 103 51.5
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 1.4e-19 101.3 229 32.8
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 2.6e-18 97.1 79 59.5
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-17 94.7 101 53.5
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 3.7e-17 93.2 84 52.4
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 7.8e-15 85.5 99 47.5
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 1.0e-14 85.1 68 58.8
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.2e-12 78.2 49 71.4
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 2.1e-12 77.4 65 58.5
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 4.0e-11 73.2 53 66.0


User provided reference genes

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