Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.0e-147 526.9 306 100.0
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.4e-96 357.1 322 63.4
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.0e-96 355.5 322 63.7
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.9e-93 346.7 272 65.8
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 1.1e-90 337.4 317 59.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 2.8e-89 332.8 238 69.7
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.0e-87 326.6 285 63.9
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 6.0e-84 315.1 315 58.1
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 2.3e-83 313.2 234 66.2
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 3.0e-83 312.8 238 65.1
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 3.0e-83 312.8 243 63.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 3.9e-83 312.4 240 64.6
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 3.9e-83 312.4 241 63.5
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 5.1e-83 312.0 244 63.1
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 3.3e-82 309.3 233 65.7
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.3e-82 309.3 239 61.9
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 9.6e-82 307.8 238 61.8
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 9.6e-82 307.8 330 53.9
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 9.6e-82 307.8 332 56.9
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.3e-81 307.4 238 63.9
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.6e-81 307.0 306 53.6
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.6e-81 307.0 239 61.5
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 6.2e-81 305.1 311 56.3
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.4e-80 303.9 223 66.4
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.4e-80 303.9 233 63.1
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.8e-80 303.5 311 54.7
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 6.9e-80 301.6 238 62.2
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 6.9e-80 301.6 231 64.5
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-79 300.8 238 62.2
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 1.2e-79 300.8 250 64.0
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.2e-79 300.8 244 61.9
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.0e-79 300.1 231 62.8
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 2.6e-79 299.7 236 62.7
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 2.6e-79 299.7 239 59.0
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.5e-79 298.9 318 54.4
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 7.6e-79 298.1 243 60.5
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.3e-78 297.4 222 64.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.3e-78 297.4 227 63.0
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.9e-78 296.2 227 64.3
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 3.8e-78 295.8 237 60.3
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 6.4e-78 295.0 232 61.2
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 1.1e-77 294.3 236 61.9
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.1e-77 294.3 238 61.8
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 3.2e-77 292.7 230 63.9
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 4.2e-77 292.4 329 49.5
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 5.4e-77 292.0 234 60.7
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 9.3e-77 291.2 237 59.9
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.3e-77 291.2 285 55.4
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-76 290.4 233 61.8
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.6e-76 290.4 247 62.3
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 2.7e-76 289.7 230 62.6
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 3.5e-76 289.3 227 61.2
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.5e-76 289.3 248 58.5
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.5e-76 289.3 242 59.5
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.0e-76 288.5 331 51.7
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 7.9e-76 288.1 227 62.6
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 7.9e-76 288.1 236 59.3
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 7.9e-76 288.1 231 61.5
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.3e-75 287.3 338 50.6
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.8e-75 287.0 331 51.7
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.3e-75 286.6 238 57.6
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.9e-75 285.8 287 53.3
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 3.9e-75 285.8 235 61.3
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 2.5e-74 283.1 237 58.2
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 3.3e-74 282.7 243 57.6
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 3.3e-74 282.7 242 57.4
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 3.3e-74 282.7 242 57.4
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 5.6e-74 282.0 238 60.1
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 7.4e-74 281.6 246 58.5
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 7.4e-74 281.6 234 61.5
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 7.4e-74 281.6 232 59.5
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.3e-73 280.8 276 51.4
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 2.8e-73 279.6 240 55.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 2.8e-73 279.6 238 57.6
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 4.8e-73 278.9 230 61.3
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 4.8e-73 278.9 217 63.6
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.1e-72 277.7 220 61.8
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.8e-72 276.9 228 58.8
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 2.4e-72 276.6 240 57.1
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.4e-72 276.6 229 61.1
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 3.1e-72 276.2 242 57.4
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 6.9e-72 275.0 272 55.5
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 6.9e-72 275.0 242 57.4
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 9.0e-72 274.6 241 59.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 9.0e-72 274.6 226 58.8
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.2e-71 274.2 241 56.0
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.2e-71 274.2 280 55.7
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 2.6e-71 273.1 225 60.0
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 5.8e-71 271.9 243 55.6
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.3e-70 270.8 238 55.0
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 8.4e-70 268.1 250 54.4
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.9e-69 266.9 234 57.3
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 2.7e-68 263.1 322 48.1
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.8e-67 260.4 240 53.3
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.8e-67 260.4 240 53.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 6.7e-67 258.5 202 61.4
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 9.0e-64 248.1 293 47.1
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-63 247.7 289 45.3
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.1e-61 241.1 220 55.5
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 2.7e-60 236.5 208 58.2
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 3.9e-59 232.6 224 53.1
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.5e-55 219.2 233 51.1
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 1.7e-54 217.2 229 52.8
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 7.2e-53 211.8 171 60.8
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 2.1e-52 210.3 144 69.4
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 6.1e-52 208.8 149 65.1
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 5.1e-51 205.7 214 50.5
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 8.8e-51 204.9 182 55.5
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.1e-50 204.5 212 49.1
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.9e-45 187.2 226 46.9
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 3.2e-45 186.4 246 43.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.2e-41 173.7 214 44.9
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.5e-39 167.5 146 54.8
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.2e-38 163.7 216 42.1
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.2e-38 163.7 216 42.1
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.9e-38 163.3 143 55.2
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 8.5e-38 161.8 220 41.8
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 9.4e-37 158.3 181 47.5
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 3.7e-33 146.4 199 41.7
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 7.5e-26 122.1 86 70.9
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 5.4e-24 115.9 182 40.1
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.7e-22 110.9 88 62.5
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 3.2e-21 106.7 209 32.1
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.4e-08 63.9 78 43.6
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 3.2e-08 63.5 243 20.6


User provided reference genes

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