Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037510 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.2e-143 513.1 239 100.0
CSS0003496 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.2e-127 459.9 239 90.0
CSS0046904 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.6e-124 449.5 238 89.1
CSS0016209 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.4e-120 436.4 230 87.8
CSS0037570 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.8e-118 428.3 230 87.0
CSS0049203 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.1e-68 263.1 288 55.9
CSS0021942 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 8.9e-59 231.1 168 66.1
CSS0032941 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.9e-56 223.4 167 63.5
CSS0038202 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.0e-54 216.1 168 63.1
CSS0039917 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.4e-50 202.6 209 51.7
CSS0049128 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.4e-48 195.3 170 58.2
CSS0027407 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 5.2e-43 178.7 191 49.2
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.8e-19 100.5 233 30.5
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 6.5e-17 92.0 222 31.1
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 8.4e-17 91.7 222 31.1
CSS0042521 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 4.2e-16 89.4 63 65.1
CSS0003075 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 7.1e-16 88.6 61 67.2
CSS0036390 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.1e-15 87.0 61 65.6
CSS0036746 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.0e-14 84.7 61 63.9
CSS0025686 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.8e-14 84.0 58 65.5
CSS0001090 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 3.9e-14 82.8 61 63.9
vmacro14269 Vaccinium macrocarpon HOM05D001028 ORTHO05D010968 1.1e-13 81.3 217 27.6
CSS0015583 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.5e-13 80.1 61 59.0
CSS0045767 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.5e-13 80.1 61 62.3
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 5.7e-13 79.0 211 29.9
CSS0043524 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 1.3e-12 77.8 58 63.8
CSS0012828 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D113512 1.6e-12 77.4 104 42.3
CSS0009733 Camellia sinensis var. sinensis HOM05D010068 ORTHO05D010968 2.2e-12 77.0 61 60.7
vmacro21216 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 2.4e-11 73.6 196 30.1
CSS0015930 Camellia sinensis var. sinensis HOM05D019326 ORTHO05D010968 3.2e-08 63.2 32 87.5
QL09p053831 Quercus lobata HOM05D010068 ORTHO05D010968 2.1e-07 60.5 136 33.8
CSS0041162 Camellia sinensis var. sinensis HOM05D019326 ORTHO05D010968 5.1e-06 55.8 30 83.3


User provided reference genes

Program Settings