Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 6.6e-69 263.8 127 100.0
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.1e-59 230.3 113 98.2
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.8e-57 224.2 118 94.1
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 2.3e-53 212.2 116 89.7
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 2.3e-53 212.2 116 89.7
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.0e-53 211.8 118 87.3
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 3.9e-53 211.5 116 88.8
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 5.1e-53 211.1 116 87.1
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 5.1e-53 211.1 116 88.8
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 6.6e-53 210.7 116 88.8
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 6.6e-53 210.7 116 88.8
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 6.6e-53 210.7 116 88.8
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 6.6e-53 210.7 116 88.8
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 8.7e-53 210.3 116 88.8
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 8.7e-53 210.3 116 88.8
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 8.7e-53 210.3 116 88.8
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 1.1e-52 209.9 116 88.8
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.5e-52 209.5 116 86.2
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 1.5e-52 209.5 116 86.2
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 1.5e-52 209.5 116 87.9
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.5e-52 209.5 116 87.1
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 1.5e-52 209.5 116 86.2
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 1.9e-52 209.1 116 86.2
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 2.5e-52 208.8 116 86.2
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 2.5e-52 208.8 116 86.2
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 3.3e-52 208.4 116 86.2
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 3.3e-52 208.4 116 87.9
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.6e-52 207.6 116 87.1
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 5.6e-52 207.6 116 87.1
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 5.6e-52 207.6 116 87.9
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 5.6e-52 207.6 116 87.1
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 7.3e-52 207.2 116 87.1
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 7.3e-52 207.2 115 87.8
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 7.3e-52 207.2 116 87.9
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 7.3e-52 207.2 116 87.9
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 7.3e-52 207.2 116 85.3
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 9.6e-52 206.8 116 85.3
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 9.6e-52 206.8 116 86.2
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 9.6e-52 206.8 116 87.9
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 9.6e-52 206.8 116 86.2
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 1.2e-51 206.5 116 86.2
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 1.2e-51 206.5 116 85.3
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 1.2e-51 206.5 116 87.1
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 1.2e-51 206.5 116 86.2
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 1.6e-51 206.1 116 85.3
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 1.6e-51 206.1 116 85.3
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 1.6e-51 206.1 116 85.3
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 1.6e-51 206.1 116 86.2
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 1.6e-51 206.1 116 86.2
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 2.1e-51 205.7 116 86.2
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 2.1e-51 205.7 116 86.2
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 2.1e-51 205.7 116 84.5
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 2.1e-51 205.7 116 87.1
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 85.3
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 86.2
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 85.3
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 86.2
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 84.5
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 2.8e-51 205.3 116 85.3
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 85.3
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 85.3
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 3.6e-51 204.9 116 84.5
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 4.7e-51 204.5 116 84.5
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 4.7e-51 204.5 116 84.5
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 6.2e-51 204.1 116 85.3
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 6.2e-51 204.1 116 86.2
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 6.2e-51 204.1 115 87.0
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 8.1e-51 203.8 116 85.3
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 8.1e-51 203.8 116 83.6
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 8.1e-51 203.8 116 85.3
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 85.3
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 84.5
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 83.6
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 85.3
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 86.2
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 84.5
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 1.1e-50 203.4 116 84.5
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 1.4e-50 203.0 124 79.0
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 1.4e-50 203.0 118 82.2
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 1.8e-50 202.6 116 82.8
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 1.8e-50 202.6 116 84.5
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 2.4e-50 202.2 116 83.6
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 2.4e-50 202.2 116 83.6
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 3.1e-50 201.8 116 84.5
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 3.1e-50 201.8 116 83.6
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 3.1e-50 201.8 116 83.6
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 4.0e-50 201.4 116 83.6
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 4.0e-50 201.4 116 84.5
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 4.0e-50 201.4 116 82.8
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 5.2e-50 201.1 116 83.6
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 6.9e-50 200.7 116 83.6
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 6.9e-50 200.7 116 83.6
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 6.9e-50 200.7 116 83.6
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 9.0e-50 200.3 115 83.5
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 9.0e-50 200.3 116 82.8
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 9.0e-50 200.3 116 82.8
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 9.0e-50 200.3 116 82.8
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 1.2e-49 199.9 116 83.6
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 2.6e-49 198.7 116 81.9
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 2.6e-49 198.7 116 81.9
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 9.9e-49 196.8 116 81.9
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 9.9e-49 196.8 116 81.9
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 2.2e-48 195.7 116 79.3
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 4.9e-48 194.5 116 81.0
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 1.1e-47 193.4 116 78.4
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 1.9e-47 192.6 116 78.4
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 3.2e-47 191.8 116 79.3
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 5.4e-47 191.0 116 76.7
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 9.3e-47 190.3 116 76.7
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 1.6e-46 189.5 116 76.7
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 3.5e-46 188.3 117 76.9
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.3e-45 185.7 108 82.4
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 3.9e-45 184.9 115 77.4
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 2.5e-44 182.2 109 81.7
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 3.3e-44 181.8 116 76.7
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 1.1e-42 176.8 116 74.1
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 1.1e-42 176.8 115 73.9
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 4.0e-42 174.9 112 75.9
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 4.0e-42 174.9 110 78.2
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 2.6e-41 172.2 112 75.0
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 3.4e-41 171.8 115 71.3
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 6.0e-38 161.0 112 71.4
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 3.3e-36 155.2 112 69.6
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 2.8e-35 152.1 81 88.9
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 3.7e-35 151.8 81 88.9
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 4.8e-35 151.4 81 88.9
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 3.0e-29 132.1 113 56.6
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 3.3e-28 128.6 116 61.2
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 6.3e-19 97.8 116 40.5
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 5.3e-18 94.7 116 40.5
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 9.0e-18 94.0 55 81.8
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 1.2e-17 93.6 60 71.7
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 1.5e-17 93.2 79 62.0
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 6.1e-14 81.3 112 40.2
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 1.4e-13 80.1 42 90.5
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 2.6e-09 65.9 31 93.5


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