Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017971 Camellia sinensis var. sinensis HOM05D043613 ORTHO05D111333 4.2e-49 197.6 92 100.0
CSS0037452 Camellia sinensis var. sinensis HOM05D043613 ORTHO05D112088 4.2e-49 197.6 92 100.0
Dinv05425 Davidia involucrata HOM05D000008 ORTHO05D000005 3.1e-20 101.7 92 56.5
Actinidia08388 Actinidia chinensis HOM05D000008 ORTHO05D000005 8.8e-15 83.6 91 53.8
Dinv39716 Davidia involucrata HOM05D000008 ORTHO05D000005 8.8e-15 83.6 92 48.9
Rhsim06G0163100 Rhododendron simsii HOM05D000008 ORTHO05D000005 9.8e-14 80.1 95 47.4
Ciclev10014958m.g Citrus clementina HOM05D000008 ORTHO05D000005 1.1e-12 76.6 89 43.8
Actinidia03604 Actinidia chinensis HOM05D000008 ORTHO05D000005 7.0e-12 73.9 76 55.3
Cfa014390 Carpinus fangiana HOM05D000008 ORTHO05D000005 4.5e-11 71.2 88 47.7
TAR626G0194 Trochodendron aralioides HOM05D000008 ORTHO05D000005 4.5e-11 71.2 85 47.1
Nn1g03504 Nelumbo nucifera HOM05D000008 ORTHO05D000005 1.0e-10 70.1 80 45.0
Duzib251G0870 Durio zibethinus HOM05D000008 ORTHO05D000005 3.8e-10 68.2 86 45.3
Nitab4.5_0009259g0010 Nicotiana tabacum HOM05D000008 ORTHO05D000005 3.8e-10 68.2 83 43.4
Duzib248G1081 Durio zibethinus HOM05D000008 ORTHO05D000005 5.0e-10 67.8 86 45.3
CiPaw.03G159500 Carya illinoinensis HOM05D000008 ORTHO05D000005 1.5e-09 66.2 90 43.3
Peaxi162Scf00007g00823 Petunia axillaris HOM05D000008 ORTHO05D000005 1.9e-09 65.9 95 37.9
Manes.13G069726 Manihot esculenta HOM05D000008 ORTHO05D000005 2.5e-09 65.5 93 44.1
QL08p032976 Quercus lobata HOM05D000008 ORTHO05D000005 2.5e-09 65.5 89 42.7
TAR627G0664 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.2e-08 63.2 79 46.8
Cpa.g.sc87.85 Carica papaya HOM05D000008 ORTHO05D000005 2.1e-08 62.4 86 46.5
Thecc.02G365400 Theobroma cacao HOM05D000008 ORTHO05D000005 2.1e-08 62.4 86 47.7
Cc05_g04370 Coffea canephora HOM05D000008 ORTHO05D000005 3.6e-08 61.6 79 43.0
VMungo1080G0107 Vigna mungo HOM05D000008 ORTHO05D000005 6.1e-08 60.8 89 43.8
Glyma.12G193300 Glycine max HOM05D000008 ORTHO05D000005 1.0e-07 60.1 89 42.7
Cfa020327 Carpinus fangiana HOM05D000008 ORTHO05D000005 1.8e-07 59.3 90 38.9
Lj1A765T39 Lonicera japonica HOM05D000008 ORTHO05D000005 1.8e-07 59.3 87 37.9
Phvul.005G115500 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 2.3e-07 58.9 89 42.7
Potri.002G228700 Populus trichocarpa HOM05D000008 ORTHO05D000005 3.0e-07 58.5 94 42.6
Glyma.13G309200 Glycine max HOM05D000008 ORTHO05D000005 6.8e-07 57.4 89 41.6
CiPaw.12G130900 Carya illinoinensis HOM05D000008 ORTHO05D000005 8.9e-07 57.0 80 40.0
Haze_09696 Corylus avellana HOM05D000008 ORTHO05D000005 8.9e-07 57.0 90 36.7
CiPaw.11G191100 Carya illinoinensis HOM05D000008 ORTHO05D000005 1.5e-06 56.2 80 38.8
SalBow7G2498 Salvia bowleyana HOM05D000008 ORTHO05D000005 2.0e-06 55.8 80 40.0
ClCG02G001960 Citrullus lanatus HOM05D000008 ORTHO05D000005 2.6e-06 55.5 94 40.4
CANSAT64G2418 Cannabis sativa HOM05D000008 ORTHO05D000005 3.4e-06 55.1 105 40.0
Atru.chr6.3193 Acer truncatum HOM05D000008 ORTHO05D000005 5.7e-06 54.3 98 38.8
PGR042G2684 Punica granatum HOM05D000008 ORTHO05D000005 7.5e-06 53.9 86 38.4
QL07p008186 Quercus lobata HOM05D000008 ORTHO05D000005 9.8e-06 53.5 80 37.5


User provided reference genes

Program Settings