Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037401 Camellia sinensis var. sinensis HOM05D005726 ORTHO05D001733 1.4e-49 199.5 117 100.0
PSO170G6562 Papaver somniferum HOM05D005726 ORTHO05D001733 1.2e-16 90.1 126 42.9
Nn1g05896 Nelumbo nucifera HOM05D005726 ORTHO05D001733 2.7e-16 89.0 112 48.2
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 4.6e-16 88.2 111 44.1
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 4.6e-16 88.2 117 50.4
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 6.0e-16 87.8 114 49.1
DCAR_003698 Daucus carota HOM05D005726 ORTHO05D001733 1.7e-15 86.3 111 49.5
TAR625G1501 Trochodendron aralioides HOM05D005726 ORTHO05D001733 1.7e-15 86.3 112 46.4
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 2.3e-15 85.9 112 44.6
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 3.9e-15 85.1 111 48.6
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 8.6e-15 84.0 117 47.9
Migut.N01283 Erythranthe guttata HOM05D005726 ORTHO05D001733 1.6e-13 79.7 120 46.7
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 1.6e-13 79.7 119 45.4
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 1.6e-13 79.7 113 45.1
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 3.6e-13 78.6 111 42.3
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 3.6e-13 78.6 111 42.3
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.4e-12 76.6 115 44.3
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.3e-12 75.9 111 40.5
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 3.1e-12 75.5 108 49.1
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 4.0e-12 75.1 116 41.4
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 1.5e-11 73.2 109 43.1
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 1.5e-11 73.2 110 40.9
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 4.4e-11 71.6 113 46.0
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 9.9e-11 70.5 111 39.6
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 4.9e-10 68.2 109 41.3
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 1.4e-09 66.6 112 43.8
Sc15g0004980 Simmondsia chinensis HOM05D003064 ORTHO05D001733 1.4e-09 66.6 110 40.9
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 3.2e-09 65.5 100 50.0
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 3.2e-09 65.5 99 42.4
Nitab4.5_0002561g0020 Nicotiana tabacum HOM05D005726 ORTHO05D001733 5.4e-09 64.7 112 36.6
Cc02_g16550 Coffea canephora HOM05D005726 ORTHO05D001733 9.2e-09 63.9 114 43.0
Potri.002G022100 Populus trichocarpa HOM05D005726 ORTHO05D001733 9.2e-09 63.9 115 39.1
TWI56G0219 Tripterygium wilfordii HOM05D005726 ORTHO05D001733 2.1e-08 62.8 111 36.9
Ah.11g039720 Amaranthus hybridus HOM05D005726 ORTHO05D001733 4.6e-08 61.6 114 37.7
ATR0810G150 Amborella trichopoda HOM05D005726 ORTHO05D001733 6.0e-08 61.2 126 35.7
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 6.0e-08 61.2 112 41.1
Sopen04g035070 Solanum pennellii HOM05D005726 ORTHO05D001733 6.0e-08 61.2 115 36.5
PGSC0003DMG400009937 Solanum tuberosum HOM05D005726 ORTHO05D001733 6.0e-08 61.2 115 36.5
Manes.05G147300 Manihot esculenta HOM05D005726 ORTHO05D001733 7.8e-08 60.8 114 40.4
MBI05_g46327_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.0e-07 60.5 101 41.6
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 2.3e-07 59.3 117 36.8
THA.LOC104807528 Tarenaya hassleriana HOM05D003064 ORTHO05D001733 2.3e-07 59.3 113 36.3
RcHm_v2.0_Chr6g0302871 Rosa chinensis HOM05D005726 ORTHO05D001733 3.9e-07 58.5 111 36.0
Manes.04G078400 Manihot esculenta HOM05D005726 ORTHO05D001733 5.1e-07 58.2 97 42.3
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 6.6e-07 57.8 117 35.9
THA.LOC104811059 Tarenaya hassleriana HOM05D003064 ORTHO05D001733 6.6e-07 57.8 110 39.1
EL10Ac1g02194 Beta vulgaris HOM05D005726 ORTHO05D001733 8.6e-07 57.4 116 34.5
MD05G1115400 Malus domestica HOM05D007714 ORTHO05D009659 8.6e-07 57.4 115 31.3
Atru.chr13.290 Acer truncatum HOM05D005726 ORTHO05D001733 1.1e-06 57.0 117 35.9
Thecc.08G044700 Theobroma cacao HOM05D005726 ORTHO05D001733 1.1e-06 57.0 108 32.4
C02p35760 Brassica napus HOM05D003064 ORTHO05D001733 1.5e-06 56.6 118 35.6
CiPaw.07G149600 Carya illinoinensis HOM05D005726 ORTHO05D001733 1.5e-06 56.6 110 32.7
Gorai.004G017800 Gossypium raimondii HOM05D003064 ORTHO05D001733 1.5e-06 56.6 109 34.9
QL02p011637 Quercus lobata HOM05D005726 ORTHO05D001733 1.5e-06 56.6 110 33.6
Eucgr.J01788 Eucalyptus grandis HOM05D003064 ORTHO05D001733 1.9e-06 56.2 115 33.9
MD08G1013100 Malus domestica HOM05D005726 ORTHO05D001733 1.9e-06 56.2 113 38.1
Ciclev10003161m.g Citrus clementina HOM05D005726 ORTHO05D001733 2.5e-06 55.8 108 35.2
Sed0021833 Sechium edule HOM05D005726 ORTHO05D001733 2.5e-06 55.8 115 34.8
Gohir.D08G022500 Gossypium hirsutum HOM05D003064 ORTHO05D001733 3.3e-06 55.5 109 35.8
AL6G31410 Arabidopsis lyrata HOM05D003064 ORTHO05D001733 4.3e-06 55.1 112 39.3
CANSAT01G1229 Cannabis sativa HOM05D005726 ORTHO05D001733 4.3e-06 55.1 126 34.9
Ciclev10017191m.g Citrus clementina HOM05D003064 ORTHO05D001733 4.3e-06 55.1 104 34.6
Gohir.A08G012000 Gossypium hirsutum HOM05D003064 ORTHO05D001733 4.3e-06 55.1 109 35.8
MBI05_g46324_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 4.3e-06 55.1 104 40.4
Aqoxy1G00039 Aquilegia oxysepala HOM05D003064 ORTHO05D001733 5.6e-06 54.7 118 34.7
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 5.6e-06 54.7 114 33.3
Aa31LG1G14330 Aethionema arabicum HOM05D003064 ORTHO05D001733 7.3e-06 54.3 105 37.1
Carub.0008s0720 Capsella rubella HOM05D005726 ORTHO05D001733 7.3e-06 54.3 112 32.1
Glyma.04G024200 Glycine max HOM05D005726 ORTHO05D001733 7.3e-06 54.3 113 37.2
Gorai.010G004200 Gossypium raimondii HOM05D005726 ORTHO05D001733 7.3e-06 54.3 108 33.3
Lalb_Chr25g0283731 Lupinus albus HOM05D003064 ORTHO05D001733 7.3e-06 54.3 118 33.9
Oeu037538.1 Olea europaea HOM05D005726 ORTHO05D001733 7.3e-06 54.3 109 32.1
PSO339G6128 Papaver somniferum HOM05D003064 ORTHO05D001733 7.3e-06 54.3 121 33.9
PSO384G3054 Papaver somniferum HOM05D003064 ORTHO05D001733 7.3e-06 54.3 121 33.9
BcaB08g36562 Brassica carinata HOM05D003064 ORTHO05D001733 9.5e-06 53.9 118 34.7
TAR623G1618 Trochodendron aralioides HOM05D003064 ORTHO05D001733 9.5e-06 53.9 115 33.0


User provided reference genes

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