Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.3e-103 379.8 194 100.0
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.1e-94 348.2 195 94.4
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.8e-46 189.9 228 56.1
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.9e-43 179.9 194 61.3
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.8e-41 173.3 215 56.7
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 8.9e-41 171.0 233 54.5
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 7.5e-40 167.9 232 51.3
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.2e-38 162.5 233 53.2
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 3.2e-38 162.5 280 45.7
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.3e-36 156.4 241 49.4
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.9e-35 153.3 256 47.7
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 5.6e-35 151.8 247 49.4
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 9.5e-35 151.0 225 48.0
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.2e-34 150.6 256 45.3
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 1.4e-33 147.1 165 58.8
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 3.1e-33 146.0 260 47.3
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 4.0e-33 145.6 237 44.7
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.2e-32 144.1 233 45.5
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.6e-32 142.9 217 46.5
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.4e-32 142.5 245 44.1
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 5.8e-32 141.7 246 45.5
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 5.8e-32 141.7 261 43.7
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 7.5e-32 141.4 252 44.4
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.7e-31 140.2 242 43.8
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 4.9e-31 138.7 251 44.2
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 6.4e-31 138.3 217 44.2
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 6.4e-31 138.3 246 44.3
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 8.3e-31 137.9 227 46.3
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 1.9e-30 136.7 158 56.3
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.2e-29 134.0 239 46.9
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.1e-29 133.3 240 43.8
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 1.0e-28 131.0 201 45.8
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.3e-28 130.6 229 42.4
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 3.0e-28 129.4 207 45.4
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.5e-27 124.4 255 42.7
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.1e-26 123.2 247 40.9
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 3.1e-25 119.4 270 40.4
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 4.0e-25 119.0 247 41.3
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.9e-25 117.9 254 40.9
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.2e-24 117.5 265 40.4
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.4e-24 115.9 254 41.3
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 3.4e-24 115.9 147 54.4
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.8e-24 115.2 248 40.3
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 9.9e-24 114.4 223 42.2
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.9e-23 112.8 130 53.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 8.4e-23 111.3 185 42.7
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 3.2e-22 109.4 208 44.2
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.4e-22 108.6 247 38.9
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 9.2e-22 107.8 221 40.7
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.2e-21 107.5 275 37.1
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.5e-21 105.9 248 39.9
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 6.0e-21 105.1 272 39.3
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.0e-20 104.4 244 41.0
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.3e-20 104.0 247 37.7
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 3.0e-20 102.8 272 37.1
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.1e-19 100.9 209 39.7
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 1.5e-19 100.5 224 38.8
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 2.5e-19 99.8 207 40.1
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 3.3e-19 99.4 175 41.7
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 7.3e-19 98.2 220 38.6
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 1.2e-18 97.4 225 38.7
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 2.8e-18 96.3 219 39.7
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.8e-18 96.3 248 38.3
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.8e-18 96.3 220 40.5
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.8e-18 96.3 248 38.3
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 2.8e-18 96.3 221 41.2
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 3.6e-18 95.9 189 41.3
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 4.7e-18 95.5 219 39.7
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.2e-18 95.1 216 38.9
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.1e-17 94.4 220 40.0
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 2.4e-17 93.2 121 49.6
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 4.0e-17 92.4 220 39.1
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 6.9e-17 91.7 116 52.6
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.5e-16 90.5 206 37.9
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 5.8e-16 88.6 192 40.1
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.7e-15 87.0 242 36.4
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 3.8e-15 85.9 225 37.8
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 7.1e-14 81.6 143 44.8
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.2e-13 80.9 199 35.2
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 3.5e-13 79.3 207 34.8
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 3.5e-13 79.3 207 34.8
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 3.5e-13 79.3 207 34.8
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 2.3e-12 76.6 133 45.1
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 6.6e-12 75.1 206 31.6
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 1.5e-11 73.9 201 34.8
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.5e-11 73.2 215 33.0
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 7.3e-11 71.6 209 32.1
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 9.6e-11 71.2 203 32.0
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 1.3e-10 70.9 208 32.7
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 2.8e-10 69.7 204 31.9
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 6.2e-10 68.6 210 31.9
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 8.1e-10 68.2 206 33.0
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.8e-09 67.0 199 32.7
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 2.4e-09 66.6 202 33.2
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 6.9e-09 65.1 187 33.2
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 1.2e-08 64.3 114 39.5
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.6e-08 63.2 205 35.1
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 3.4e-08 62.8 203 35.0
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 4.5e-08 62.4 134 37.3
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 5.8e-08 62.0 203 33.0
C07p23380 Brassica napus HOM05D009961 ORTHO05D008483 2.9e-07 59.7 190 30.0
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.9e-07 59.7 119 41.2
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 1.1e-06 57.8 192 32.8
MELO3C011356.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.1e-06 57.8 148 37.8
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 1.4e-06 57.4 172 34.9
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.9e-06 57.0 84 42.9
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.4e-06 56.6 84 42.9
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.4e-06 56.6 84 42.9
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 5.4e-06 55.5 88 37.5
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 7.1e-06 55.1 98 36.7
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 7.1e-06 55.1 127 32.3
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 9.3e-06 54.7 83 43.4


User provided reference genes

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