Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037385 Camellia sinensis var. sinensis HOM05D008810 ORTHO05D010971 7.7e-165 585.1 756 100.0
Rhsim13G0050100 Rhododendron simsii HOM05D008810 ORTHO05D010971 3.8e-95 353.6 756 82.5
vmacro02795 Vaccinium macrocarpon HOM05D008810 ORTHO05D010971 4.9e-95 353.2 756 76.2
Actinidia23380 Actinidia chinensis HOM05D008810 ORTHO05D010971 2.7e-77 294.3 200 71.5
Dinv19149 Davidia involucrata HOM05D008810 ORTHO05D010971 7.6e-72 276.2 203 67.0
Dinv28839 Davidia involucrata HOM05D008810 ORTHO05D010971 7.6e-72 276.2 203 67.0
Nn1g08193 Nelumbo nucifera HOM05D008810 ORTHO05D010971 3.6e-53 214.2 187 56.1
MSTRG.12764 Avicennia marina HOM05D008810 ORTHO05D010971 4.8e-50 203.8 372 54.6
Prupe.8G196100 Prunus persica HOM05D008810 ORTHO05D010971 8.2e-50 203.0 204 49.5
MD10G1157300 Malus domestica HOM05D008810 ORTHO05D010971 3.8e-47 194.1 176 50.6
Ciclev10018778m.g Citrus clementina HOM05D008810 ORTHO05D010971 2.1e-45 188.3 204 48.5
GSVIVG01005921001 Vitis vinifera HOM05D008810 ORTHO05D010971 2.7e-45 188.0 205 51.2
Aqoxy2G03931 Aquilegia oxysepala HOM05D008810 ORTHO05D010971 2.0e-43 181.8 179 48.6
Cpa.g.sc8.119 Carica papaya HOM05D008810 ORTHO05D010971 1.3e-42 179.1 179 50.8
Duzib138G0800 Durio zibethinus HOM05D008810 ORTHO05D010971 1.7e-42 178.7 202 46.0
ECA247G3188 Erigeron canadensis HOM05D008810 ORTHO05D010971 2.4e-41 174.9 358 55.0
Thecc.01G216300 Theobroma cacao HOM05D008810 ORTHO05D010971 7.0e-41 173.3 200 47.0
Gorai.001G188700 Gossypium raimondii HOM05D008810 ORTHO05D010971 5.0e-39 167.2 202 43.1
Gohir.A07G161900 Gossypium hirsutum HOM05D008810 ORTHO05D010971 8.5e-39 166.4 202 43.1
Gohir.D07G165100 Gossypium hirsutum HOM05D008810 ORTHO05D010971 1.1e-38 166.0 202 42.6
Lj2P1121T65 Lonicera japonica HOM05D008810 ORTHO05D010971 2.3e-36 158.3 186 48.9
Lsat_1_v5_gn_9_17361 Lactuca sativa HOM05D008810 ORTHO05D010971 2.2e-31 141.7 168 45.2
HanXRQChr08g0232341 Helianthus annuus HOM05D008810 ORTHO05D010971 7.2e-30 136.7 168 41.1
Carub.0003s0682 Capsella rubella HOM05D008810 ORTHO05D010971 8.8e-28 129.8 177 40.7
Migut.N00641 Erythranthe guttata HOM05D008810 ORTHO05D010971 1.2e-27 129.4 177 39.5
Sp3g06240 Schrenkiella parvula HOM05D008810 ORTHO05D010971 7.5e-27 126.7 174 39.7
CARHR081940 Cardamine hirsuta HOM05D008810 ORTHO05D010971 4.9e-26 124.0 178 37.6
AL3G18590 Arabidopsis lyrata HOM05D008810 ORTHO05D010971 2.4e-25 121.7 169 40.8
AT3G07290 Arabidopsis thaliana HOM05D008810 ORTHO05D010971 2.4e-25 121.7 177 38.4
MBI11_g07406_MAGBIO Magnolia biondii HOM05D008810 ORTHO05D010971 3.1e-25 121.3 204 37.3
BNapus_Darmor_BZH_scaffold_109p00140 Brassica napus HOM05D008810 ORTHO05D010971 4.5e-24 117.5 157 39.5
BraA01t04388Z Brassica rapa HOM05D008810 ORTHO05D010971 1.7e-23 115.5 157 38.9
BolC1t05560H Brassica oleracea HOM05D008810 ORTHO05D010971 2.3e-23 115.2 157 40.1
THA.LOC104802656 Tarenaya hassleriana HOM05D008810 ORTHO05D010971 2.9e-23 114.8 179 38.0
Aa31LG5G17860 Aethionema arabicum HOM05D008810 ORTHO05D010971 2.5e-22 111.7 163 39.3
BcaB04g21297 Brassica carinata HOM05D008810 ORTHO05D010971 1.5e-19 102.4 158 36.1
SGA_v2.0_scaffold77G25274 Striga asiatica HOM05D008810 ORTHO05D010971 1.9e-14 85.5 153 36.6
TWI75G1111 Tripterygium wilfordii HOM05D008810 ORTHO05D010971 5.6e-14 84.0 152 34.9
Oeu033330.1 Olea europaea HOM05D008810 ORTHO05D010971 7.5e-11 73.6 76 46.1
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 7.0e-09 67.0 175 28.0
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 1.2e-08 66.2 117 40.2
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.2e-08 66.2 191 26.7
Aa31LG9G8720 Aethionema arabicum HOM05D005973 ORTHO05D007285 6.0e-08 63.9 173 28.9
EL10Ac6g15188 Beta vulgaris HOM05D003210 ORTHO05D000001 6.0e-08 63.9 125 32.0
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 7.8e-08 63.5 127 35.4
Ciclev10005379m.g Citrus clementina HOM05D000424 ORTHO05D000355 1.0e-07 63.2 118 29.7
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 1.7e-07 62.4 140 33.6
Zm00001eb376700 Zea mays HOM05D006858 ORTHO05D008767 1.7e-07 62.4 123 31.7
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 3.0e-07 61.6 134 27.6
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 3.0e-07 61.6 134 30.6
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 3.9e-07 61.2 119 36.1
Nitab4.5_0000316g0260 Nicotiana tabacum HOM05D005973 ORTHO05D007285 5.0e-07 60.8 140 30.0
Os06g0152500 Oryza sativa ssp. japonica HOM05D006858 ORTHO05D008767 5.0e-07 60.8 123 31.7
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 5.0e-07 60.8 132 30.3
Solyc01g068180.3 Solanum lycopersicum HOM05D005973 ORTHO05D007285 6.6e-07 60.5 138 29.7
COL.COLO4_19343 Corchorus olitorius HOM05D005973 ORTHO05D007285 1.1e-06 59.7 113 29.2
Dinv24080 Davidia involucrata HOM05D006596 ORTHO05D008497 1.1e-06 59.7 108 35.2
Sopen01g030120 Solanum pennellii HOM05D005973 ORTHO05D007285 1.1e-06 59.7 156 30.1
Duzib132G0284 Durio zibethinus HOM05D006858 ORTHO05D008767 1.5e-06 59.3 123 26.0
GSVIVG01031787001 Vitis vinifera HOM05D006858 ORTHO05D008767 1.5e-06 59.3 129 27.9
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 1.9e-06 58.9 133 30.1
TAR628G1172 Trochodendron aralioides HOM05D006858 ORTHO05D008767 2.5e-06 58.5 144 27.1
Ciclev10026953m.g Citrus clementina HOM05D006556 ORTHO05D008146 3.3e-06 58.2 123 26.8
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 3.3e-06 58.2 102 29.4
MD07G1026900 Malus domestica HOM05D005973 ORTHO05D007285 3.3e-06 58.2 140 31.4
Atru.BG.296.p Acer truncatum HOM05D005973 ORTHO05D007285 4.3e-06 57.8 166 28.9
Duzib106G0003 Durio zibethinus HOM05D005973 ORTHO05D007285 4.3e-06 57.8 113 31.0
Peaxi162Scf00087g00126 Petunia axillaris HOM05D005973 ORTHO05D007285 4.3e-06 57.8 138 29.7
CAN.G410.36 Capsicum annuum HOM05D005973 ORTHO05D007285 5.6e-06 57.4 158 29.1
Lalb_Chr25g0282721 Lupinus albus HOM05D005973 ORTHO05D007285 5.6e-06 57.4 139 32.4
Nitab4.5_0001775g0060 Nicotiana tabacum HOM05D005973 ORTHO05D007285 5.6e-06 57.4 156 30.1
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 7.3e-06 57.0 145 31.7
Lj3g0022967 Lotus japonicus HOM05D006400 ORTHO05D008039 7.3e-06 57.0 158 29.1
Prupe.2G027000 Prunus persica HOM05D005973 ORTHO05D007285 9.5e-06 56.6 134 28.4
SalBow2G3131 Salvia bowleyana HOM05D000891 ORTHO05D000761 9.5e-06 56.6 115 23.5
SEGI_29272 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 9.5e-06 56.6 158 24.1


User provided reference genes

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