Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037368 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.5e-256 888.3 444 100.0
CSS0048875 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-30 138.7 73 94.5
CSS0018556 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.3e-30 137.1 73 93.2
CSS0034794 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.5e-30 135.6 73 91.8
CSS0023397 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-28 131.7 73 90.4
CSS0026959 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-25 121.7 73 83.6
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-23 115.2 366 28.4
CSS0009140 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.5e-22 110.9 73 79.5
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.3e-22 110.5 377 27.3
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-21 107.5 377 27.3
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-21 107.5 377 27.3
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.7e-21 106.7 377 27.3
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 2.9e-18 97.4 69 69.6
Rhsim05G0083000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.9e-18 96.7 272 29.4
Rhsim02G0240900 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.3e-14 84.0 140 33.6
TWI09G1151 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.6e-13 81.6 148 32.4
Rhsim13G0157600 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-13 80.5 171 29.2
Rhsim08G0093200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.7e-13 80.1 170 28.8
Rhsim09G0200000 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.1e-13 79.3 116 38.8
TWI15G1167 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.8e-12 78.2 124 35.5
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.8e-12 78.2 117 35.9
Rhsim02G0038000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.1e-12 77.4 170 28.2
RhsimUnG0152200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.1e-12 77.4 116 37.9
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.1e-12 77.4 197 27.9
TWI73G0374 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.0e-12 77.0 117 35.0
Rhsim01G0089000 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.8e-12 76.3 130 33.8
Rhsim03G0048400 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.8e-12 76.3 130 33.8
CSS0036963 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.0e-11 74.7 161 32.9
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 2.0e-11 74.7 157 29.9
Rhsim09G0055100 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.0e-11 74.7 142 32.4
Sabra19G0011500 Salix brachista HOM05D000034 ORTHO05D003147 2.0e-11 74.7 236 28.0
CSS0013281 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.8e-11 73.2 182 32.4
CSS0038533 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.8e-11 73.2 163 35.0
PSO782G0821 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-11 73.2 106 38.7
CSS0036579 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.5e-11 72.8 143 35.7
CSS0008009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.8e-11 72.4 182 32.4
CSS0011309 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-10 71.6 167 32.3
CSS0014685 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.2e-10 71.2 127 34.6
CSS0019987 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-10 70.9 147 35.4
CSS0026360 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-10 70.9 161 32.9
QL10p013157 Quercus lobata HOM05D000034 ORTHO05D000037 2.9e-10 70.9 110 37.3
TWI63G0950 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.9e-10 70.9 126 32.5
vmacro01452 Vaccinium macrocarpon HOM05D000034 ORTHO05D000037 3.7e-10 70.5 116 31.0
Solyc12g150115.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 4.9e-10 70.1 134 33.6
arahy.Tifrunner.gnm1.ann1.W62SBL Arachis hypogaea HOM05D000034 ORTHO05D000037 8.3e-10 69.3 126 36.5
CSS0022102 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.3e-10 69.3 161 32.9
PSO063G2661 Papaver somniferum HOM05D000034 ORTHO05D000037 8.3e-10 69.3 106 37.7
arahy.Tifrunner.gnm1.ann1.RZM5P2 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-09 68.6 126 37.3
CSS0032828 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-09 68.2 161 32.3
Sabra19G0001300 Salix brachista HOM05D000034 ORTHO05D000037 1.9e-09 68.2 239 29.3
arahy.Tifrunner.gnm1.ann1.A4IX3N Arachis hypogaea HOM05D000034 ORTHO05D000037 2.4e-09 67.8 137 34.3
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.4e-09 67.8 134 32.8
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 3.2e-09 67.4 117 33.3
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 3.2e-09 67.4 116 33.6
PSO782G4903 Papaver somniferum HOM05D000034 ORTHO05D000037 3.2e-09 67.4 106 36.8
Atru.chr3.1792 Acer truncatum HOM05D000034 ORTHO05D000037 4.1e-09 67.0 107 34.6
PSO210G1286 Papaver somniferum HOM05D000034 ORTHO05D000037 4.1e-09 67.0 106 36.8
Solyc04g049020.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 4.1e-09 67.0 106 37.7
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.1e-09 67.0 112 34.8
TWI38G1809 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.4e-09 66.6 118 33.9
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 7.1e-09 66.2 106 32.1
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 7.1e-09 66.2 117 32.5
Atru.chr10.353 Acer truncatum HOM05D000034 ORTHO05D000037 9.2e-09 65.9 107 34.6
arahy.Tifrunner.gnm1.ann1.MKP1AB Arachis hypogaea HOM05D000034 ORTHO05D000037 9.2e-09 65.9 108 36.1
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.2e-08 65.5 125 32.8
Atru.chr5.3272 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-08 65.1 107 34.6
SHI20924 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-08 65.1 121 36.4
TWI75G0888 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.6e-08 65.1 158 29.7
PSO017G6925 Papaver somniferum HOM05D000034 ORTHO05D000037 2.1e-08 64.7 106 35.8
Peaxi162Scf00201g01410 Petunia axillaris HOM05D007579 ORTHO05D000037 2.1e-08 64.7 153 31.4
TWI38G0294 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.1e-08 64.7 126 31.7
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.1e-08 64.7 129 34.1
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.1e-08 64.7 106 35.8
PSO541G0261 Papaver somniferum HOM05D000034 ORTHO05D000037 2.7e-08 64.3 103 35.9
arahy.Tifrunner.gnm1.ann1.LVAF86 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-08 63.5 126 35.7
PSO675G3384 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-08 63.5 106 34.9
PSO732G0275 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-08 63.5 106 35.8
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 6.0e-08 63.2 106 36.8
PSO339G5100 Papaver somniferum HOM05D000034 ORTHO05D000037 6.0e-08 63.2 106 34.9
PSO541G3789 Papaver somniferum HOM05D000034 ORTHO05D000037 6.0e-08 63.2 106 34.9
Prupe.5G234400 Prunus persica HOM05D000034 ORTHO05D000037 7.8e-08 62.8 107 31.8
Os07g0116050 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 1.0e-07 62.4 113 34.5
PSO541G3074 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-07 62.4 106 34.9
PSO782G5727 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-07 62.4 106 34.0
TPR.G33386 Trifolium pratense HOM05D000034 ORTHO05D000037 1.0e-07 62.4 97 41.2
PSO063G3806 Papaver somniferum HOM05D000034 ORTHO05D000037 1.3e-07 62.0 103 35.0
TWI81G0533 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-07 62.0 108 36.1
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.7e-07 61.6 98 36.7
TWI34G0569 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.3e-07 61.2 157 27.4
TWI36G0210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.3e-07 61.2 108 36.1
Oeu059140.1 Olea europaea HOM05D000034 ORTHO05D000037 3.0e-07 60.8 112 35.7
TWI56G0722 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.0e-07 60.8 106 37.7
arahy.Tifrunner.gnm1.ann1.GL17HH Arachis hypogaea HOM05D000034 ORTHO05D000037 3.9e-07 60.5 119 32.8
CANSAT78G0143 Cannabis sativa HOM05D000034 ORTHO05D000037 3.9e-07 60.5 116 30.2
Dinv01664 Davidia involucrata HOM05D000034 ORTHO05D000037 3.9e-07 60.5 130 31.5
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-07 60.5 120 32.5
PSO210G6866 Papaver somniferum HOM05D000034 ORTHO05D000037 3.9e-07 60.5 120 32.5
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 3.9e-07 60.5 106 30.2
Atru.chr1.1505 Acer truncatum HOM05D000034 ORTHO05D000037 5.1e-07 60.1 116 35.3
Os09g0122100 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 5.1e-07 60.1 113 33.6
Os10g0468250 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 5.1e-07 60.1 113 33.6
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 5.1e-07 60.1 118 32.2
Rhsim12G0127400 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-07 60.1 103 35.0
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.1e-07 60.1 98 36.7
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.1e-07 60.1 98 36.7
TWI75G0521 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.1e-07 60.1 98 36.7
Cpa.g.sc3.384 Carica papaya HOM05D000034 ORTHO05D000037 6.6e-07 59.7 107 29.0
TWI53G0368 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.6e-07 59.7 136 30.9
Actinidia36583 Actinidia chinensis HOM05D000034 ORTHO05D000037 8.6e-07 59.3 97 39.2
CSS0044788 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 59.3 130 30.0
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 8.6e-07 59.3 108 34.3
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.6e-07 59.3 99 35.4
Hma1.2p1_1123F.1_g259380 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 8.6e-07 59.3 208 27.9
Atru.chr1.2793 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-06 58.9 109 32.1
ATR0626G023 Amborella trichopoda HOM05D000034 ORTHO05D000037 1.1e-06 58.9 106 32.1
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-06 58.9 116 31.0
Gorai.013G191100 Gossypium raimondii HOM05D000034 ORTHO05D000037 1.5e-06 58.5 101 34.7
FvH4_4g05911 Fragaria vesca HOM05D000034 ORTHO05D000037 1.9e-06 58.2 126 32.5
Lj2g0028014 Lotus japonicus HOM05D000034 ORTHO05D000037 1.9e-06 58.2 96 32.3
Sopen05g034720 Solanum pennellii HOM05D000034 ORTHO05D000037 1.9e-06 58.2 143 30.8
TWI53G1660 Tripterygium wilfordii HOM05D013465 ORTHO05D000285 1.9e-06 58.2 83 36.1
TWI56G1270 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.9e-06 58.2 106 30.2
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-06 57.8 117 30.8
CAN.G408.5 Capsicum annuum HOM05D000034 ORTHO05D000037 2.5e-06 57.8 106 36.8
RcHm_v2.0_Chr1g0313091 Rosa chinensis HOM05D000034 ORTHO05D000037 2.5e-06 57.8 126 32.5
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 3.3e-06 57.4 127 33.9
Haze_19363 Corylus avellana HOM05D000034 ORTHO05D000037 3.3e-06 57.4 118 31.4
Solyc12g042485.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 3.3e-06 57.4 112 31.2
TWI34G1515 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.3e-06 57.4 98 34.7
CSS0013348 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.3e-06 57.0 80 40.0
TWI56G1116 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.3e-06 57.0 108 33.3
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.3e-06 57.0 89 38.2
AUR62034759 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.6e-06 56.6 139 25.2
Lsat_1_v5_gn_9_80960 Lactuca sativa HOM05D009382 ORTHO05D000285 5.6e-06 56.6 95 36.8
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 7.3e-06 56.2 130 28.5
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 7.3e-06 56.2 106 28.3
Prupe.7G000100 Prunus persica HOM05D000034 ORTHO05D000037 7.3e-06 56.2 126 31.7
MBI02_g22103_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 9.5e-06 55.8 117 32.5
Prupe.6G192900 Prunus persica HOM05D000034 ORTHO05D000037 9.5e-06 55.8 102 32.4
TWI75G1289 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.5e-06 55.8 137 24.8


User provided reference genes

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