Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.1e-128 463.4 246 100.0
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.0e-122 442.6 246 96.3
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.1e-55 219.9 252 55.6
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.1e-48 197.6 249 55.8
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 7.3e-48 194.9 247 54.7
Actinidia11116 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.5e-29 134.0 244 43.9
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.6e-26 124.0 248 41.5
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 3.8e-20 102.8 245 35.5
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.0e-17 94.7 244 35.2
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.3e-17 93.6 222 33.8
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.3e-16 89.7 199 37.7
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 1.3e-15 87.8 178 38.8
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 1.8e-14 84.0 238 31.9
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.8e-14 84.0 266 33.8
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 1.7e-12 77.4 177 36.2
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.8e-12 76.3 209 33.5
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 6.4e-12 75.5 239 31.4
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 8.4e-12 75.1 210 34.8
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.1e-11 74.7 250 35.6
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 9.3e-11 71.6 194 34.5
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 1.2e-10 71.2 199 33.7
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.5e-10 69.7 256 29.3
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 3.5e-10 69.7 78 56.4
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 6.0e-10 68.9 286 31.1
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 7.9e-10 68.6 231 32.9
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 1.3e-09 67.8 208 34.6
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.8e-09 67.4 242 31.8
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 5.1e-09 65.9 181 33.1
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.5e-08 64.3 182 33.5
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 5.6e-08 62.4 255 32.5
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.3e-07 61.2 236 30.5
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.6e-07 60.8 234 29.9
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.6e-07 60.8 234 29.9
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.1e-07 60.5 234 31.6
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.1e-07 60.5 184 33.7
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 2.8e-07 60.1 94 45.7
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 2.8e-07 60.1 183 30.6
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 8.1e-07 58.5 235 31.5
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.1e-06 58.2 80 45.0
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.1e-06 58.2 207 30.9
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 1.1e-06 58.2 184 34.8
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 4.0e-06 56.2 180 31.1
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 4.0e-06 56.2 85 41.2
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 5.3e-06 55.8 183 33.9
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 5.3e-06 55.8 216 28.2
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 5.3e-06 55.8 235 32.3
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 5.3e-06 55.8 238 31.1
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 6.9e-06 55.5 237 30.4
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 6.9e-06 55.5 215 31.2
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 9.0e-06 55.1 164 33.5


User provided reference genes

Program Settings