Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 5.0e-232 807.4 394 100.0
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.1e-181 638.6 326 95.1
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 7.8e-177 624.0 397 77.3
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.7e-176 622.9 396 77.3
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.8e-173 612.8 379 78.1
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.4e-170 603.2 371 78.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 2.1e-166 589.3 427 68.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 4.7e-166 588.2 397 73.3
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.7e-161 572.4 395 72.7
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 3.5e-161 572.0 395 71.4
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 5.8e-156 554.7 377 72.4
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.9e-155 552.4 341 76.5
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.8e-155 552.0 395 69.6
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 8.4e-155 550.8 391 69.3
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.2e-153 547.0 395 69.9
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.0e-152 543.9 359 72.1
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 6.6e-152 541.2 395 69.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.3e-151 537.7 391 69.1
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 4.8e-150 535.0 390 67.9
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 4.0e-149 531.9 388 68.0
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.3e-149 531.6 387 67.2
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 9.0e-149 530.8 387 67.4
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.3e-147 526.9 347 74.4
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.3e-147 526.9 396 66.2
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.2e-147 526.2 385 66.5
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 4.9e-147 525.0 395 66.1
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.4e-146 523.5 400 65.8
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.4e-146 523.5 395 67.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 5.4e-146 521.5 394 65.5
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.0e-144 517.3 419 63.5
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 3.0e-144 515.8 394 66.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 8.7e-144 514.2 382 68.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.1e-143 513.8 400 64.5
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 5.6e-143 511.5 327 74.3
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.3e-142 510.4 390 64.1
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.8e-142 509.2 371 65.2
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 2.8e-142 509.2 392 64.8
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.1e-141 505.8 361 67.9
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 6.9e-141 504.6 360 67.5
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.2e-140 503.8 350 70.9
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 9.9e-140 500.7 393 64.4
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.2e-139 499.6 348 68.7
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.9e-139 499.2 353 67.4
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.9e-139 499.2 350 69.7
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 3.8e-139 498.8 369 65.6
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 3.8e-139 498.8 385 65.7
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.1e-138 497.3 331 70.4
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 3.2e-138 495.7 358 66.2
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 3.2e-138 495.7 396 62.6
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 5.5e-138 495.0 396 63.4
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.1e-137 493.0 363 67.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 6.0e-137 491.5 381 63.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.3e-136 489.6 388 62.9
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 3.0e-136 489.2 347 69.5
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 5.1e-136 488.4 367 66.8
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.5e-135 486.9 353 66.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.9e-135 486.5 355 67.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 4.3e-135 485.3 355 67.9
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 4.3e-135 485.3 355 67.9
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 7.4e-135 484.6 334 70.1
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 9.6e-135 484.2 373 64.6
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.6e-134 483.4 355 67.9
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 2.1e-134 483.0 334 69.2
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.7e-134 482.3 349 66.8
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.8e-133 479.9 355 67.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 2.4e-133 479.6 396 61.4
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 2.4e-133 479.6 326 70.2
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 4.0e-133 478.8 355 67.0
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.2e-132 477.2 426 56.6
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.8e-131 472.2 331 68.0
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 6.5e-131 471.5 394 61.2
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 2.1e-129 466.5 347 65.4
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.1e-129 466.5 369 63.4
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.8e-128 463.4 394 59.6
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 7.6e-124 448.0 335 64.8
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 7.6e-124 448.0 331 65.6
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.9e-122 443.4 330 63.6
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.1e-121 439.9 324 68.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.7e-121 439.5 386 59.1
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.6e-121 439.1 478 51.3
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-120 436.4 391 59.3
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.1e-119 434.1 338 62.1
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.2e-118 429.9 554 45.7
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 3.8e-115 419.1 352 61.6
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.4e-114 417.2 295 67.8
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 7.9e-113 411.4 242 78.9
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.4e-112 410.6 396 57.1
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 3.3e-111 406.0 286 67.8
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 4.8e-110 402.1 276 68.1
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.6e-108 396.4 333 60.1
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 8.8e-104 381.3 263 69.6
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.7e-103 378.6 346 58.4
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 2.6e-100 369.8 276 64.1
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.2e-90 335.1 341 51.3
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.5e-87 327.4 340 49.1
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 2.0e-87 327.0 344 48.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 7.5e-87 325.1 295 56.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 2.8e-81 306.6 175 79.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.7e-81 305.8 397 45.1
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 5.4e-77 292.4 324 45.1
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 6.8e-72 275.4 168 72.6
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.2e-62 243.8 351 41.6
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.8e-38 163.3 140 56.4
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 9.6e-34 148.7 101 75.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.2e-30 137.5 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.0e-27 127.1 100 67.0
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-19 101.3 75 70.7
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.7e-14 84.7 101 46.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 9.3e-13 79.0 59 71.2
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.1e-11 73.2 39 82.1
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.7e-11 72.8 60 53.3
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.3e-09 68.6 68 50.0
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.1e-08 63.5 99 37.4
Rhsim06G0143300 Rhododendron simsii HOM05D006713 ORTHO05D338742 2.9e-06 57.4 42 73.8


User provided reference genes

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