Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-121 439.9 217 100.0
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.3e-96 356.7 245 78.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.0e-65 253.1 225 61.8
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 3.2e-63 245.7 226 60.2
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 4.7e-59 231.9 225 57.3
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.8e-58 229.9 226 58.0
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.6e-54 216.9 224 53.1
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 6.0e-54 214.9 224 54.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.3e-53 213.8 225 54.7
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 8.7e-53 211.1 224 51.8
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.6e-52 208.4 224 52.2
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.3e-51 207.2 224 52.2
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.1e-51 206.5 223 52.5
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.8e-51 205.3 226 54.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 8.1e-51 204.5 224 51.8
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.8e-50 203.4 224 50.4
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 3.1e-50 202.6 224 53.1
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 9.0e-50 201.1 226 49.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.5e-49 200.3 224 52.2
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.0e-49 199.9 224 52.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 3.4e-49 199.1 224 48.7
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 5.8e-49 198.4 224 50.0
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.7e-48 196.8 219 52.1
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.7e-48 196.8 223 48.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.9e-48 196.1 225 49.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.1e-47 194.1 225 49.8
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.4e-47 193.7 224 49.6
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 1.4e-47 193.7 223 48.9
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.9e-47 193.4 224 49.6
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 3.2e-47 192.6 224 50.0
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.2e-46 190.7 224 49.1
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.6e-46 190.3 224 48.7
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 2.1e-46 189.9 224 48.2
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 3.5e-46 189.1 217 49.8
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 3.5e-46 189.1 224 47.3
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.6e-46 188.7 224 48.7
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.3e-45 187.2 224 48.2
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.3e-45 187.2 225 51.1
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.8e-45 186.8 206 51.0
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.3e-45 186.4 217 48.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 2.3e-45 186.4 198 53.5
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 3.0e-45 186.0 224 47.8
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 3.9e-45 185.7 224 49.1
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 5.1e-45 185.3 224 47.3
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 6.7e-45 184.9 224 47.8
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.5e-44 183.0 196 51.0
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 3.3e-44 182.6 225 47.6
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 7.4e-44 181.4 224 47.3
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 3.6e-43 179.1 224 47.3
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 6.2e-43 178.3 224 47.3
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.2e-43 178.3 200 48.5
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 8.1e-43 177.9 224 46.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.8e-42 176.8 224 46.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.8e-42 176.8 224 46.9
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.8e-42 176.8 224 46.9
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.4e-42 176.4 224 45.1
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.4e-42 176.4 224 47.3
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 3.1e-42 176.0 224 46.4
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 9.0e-42 174.5 197 53.3
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.0e-41 173.3 190 52.1
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.6e-41 172.9 208 47.1
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.6e-41 172.9 197 52.8
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 2.6e-41 172.9 196 48.5
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.4e-41 172.6 197 47.2
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.3e-40 170.6 224 45.5
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 1.3e-40 170.6 224 45.5
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.7e-40 170.2 224 48.2
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.2e-40 169.9 197 52.3
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 2.2e-40 169.9 199 47.7
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 6.4e-40 168.3 225 48.0
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 5.5e-39 165.2 224 44.6
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 7.1e-39 164.9 196 45.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.1e-38 163.3 190 48.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 2.7e-38 162.9 201 47.8
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 4.6e-38 162.2 224 46.4
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-37 160.6 214 45.3
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 7.4e-36 154.8 186 48.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 7.4e-36 154.8 216 41.2
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 4.0e-34 149.1 225 41.8
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 4.5e-33 145.6 185 40.0
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 5.8e-33 145.2 225 39.1
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.6e-33 144.8 199 45.7
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.7e-32 143.7 231 41.1
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.9e-32 142.9 224 42.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 3.2e-31 139.4 188 45.7
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 3.2e-31 139.4 207 42.5
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 7.1e-31 138.3 190 46.8
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.8e-29 133.7 188 44.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 3.0e-29 132.9 222 43.2
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 3.0e-29 132.9 197 42.1
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.9e-29 132.5 200 43.5
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 5.1e-29 132.1 190 44.2
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 6.7e-29 131.7 194 40.7
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 8.7e-29 131.3 196 46.4
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.5e-28 130.6 200 43.5
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.5e-28 129.8 177 44.1
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 9.6e-28 127.9 186 43.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.4e-26 123.2 206 37.9
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.2e-24 116.7 117 51.3
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 7.4e-20 101.7 66 71.2
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.2e-19 98.2 118 45.8
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.2e-19 98.2 118 45.8
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.3e-18 95.5 204 36.3
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 1.7e-16 90.5 49 87.8
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 5.3e-10 68.9 184 29.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.5e-09 65.9 230 24.3
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.6e-06 57.4 221 30.3


User provided reference genes

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