Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037322 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 2.9e-82 308.5 159 100.0
CSS0043236 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 3.9e-79 298.1 159 96.9
CSS0031021 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 6.7e-79 297.4 159 96.2
CSS0007988 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 8.8e-79 297.0 159 96.9
CSS0010224 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 2.6e-78 295.4 159 96.9
CSS0045184 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 7.4e-78 293.9 159 96.2
CSS0047095 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 7.4e-78 293.9 159 96.2
CSS0032709 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 2.8e-77 292.0 159 95.6
CSS0037751 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D014541 2.9e-74 282.0 159 93.1
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 1.5e-38 163.3 87 95.4
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 3.5e-35 152.1 87 86.2
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 6.6e-34 147.9 87 85.1
Dinv19381 Davidia involucrata HOM05D003697 ORTHO05D005452 6.6e-34 147.9 87 83.9
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 5.2e-31 138.3 87 78.2
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 5.2e-31 138.3 87 78.2
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 1.5e-30 136.7 87 77.0
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 2.6e-30 136.0 87 77.0
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 2.6e-30 136.0 87 77.0
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 2.6e-30 136.0 87 77.0
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 5.8e-30 134.8 87 79.3
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 5.8e-30 134.8 87 79.3
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 1.3e-29 133.7 87 74.7
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.3e-29 133.7 87 75.9
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.3e-29 133.7 87 75.9
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 1.3e-29 133.7 87 79.3
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 1.7e-29 133.3 87 75.9
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 2.2e-29 132.9 87 75.9
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 2.9e-29 132.5 87 79.3
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 2.9e-29 132.5 87 74.7
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 3.7e-29 132.1 87 72.4
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 4.9e-29 131.7 87 74.7
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 4.9e-29 131.7 87 74.7
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 4.9e-29 131.7 104 71.2
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 6.4e-29 131.3 87 75.9
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 1.4e-28 130.2 87 72.4
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 1.4e-28 130.2 87 72.4
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 3.2e-28 129.0 87 74.7
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 7.1e-28 127.9 87 74.7
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 1.6e-27 126.7 87 74.7
CAN.G798.12 Capsicum annuum HOM05D003697 ORTHO05D005452 2.1e-27 126.3 87 74.7
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 3.5e-27 125.6 87 70.1
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 1.3e-26 123.6 88 70.5
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 1.7e-26 123.2 87 70.1
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 2.3e-26 122.9 87 69.0
ClCG05G009570 Citrullus lanatus HOM05D003697 ORTHO05D005452 3.0e-26 122.5 87 67.8
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 3.0e-26 122.5 87 72.4
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 3.9e-26 122.1 87 72.4
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 5.1e-26 121.7 87 72.4
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 6.6e-26 121.3 87 71.3
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 8.6e-26 120.9 87 69.0
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 1.9e-25 119.8 87 70.1
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 3.3e-25 119.0 87 70.1
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 4.3e-25 118.6 87 70.1
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 4.3e-25 118.6 87 70.1
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 5.6e-25 118.2 87 69.0
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 5.6e-25 118.2 87 67.8
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 7.3e-25 117.9 87 70.1
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 7.3e-25 117.9 87 70.1
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 7.3e-25 117.9 87 70.1
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 9.6e-25 117.5 95 64.2
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 9.6e-25 117.5 87 69.0
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.2e-24 117.1 87 69.0
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.2e-24 117.1 87 70.1
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.6e-24 116.7 87 69.0
Gorai.008G028000 Gossypium raimondii HOM05D003697 ORTHO05D005452 1.6e-24 116.7 95 63.2
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 2.1e-24 116.3 87 70.1
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 6.2e-24 114.8 87 66.7
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 8.1e-24 114.4 87 67.8
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 1.1e-23 114.0 87 67.8
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 1.1e-23 114.0 88 69.3
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 1.1e-23 114.0 91 64.8
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.4e-23 113.6 87 66.7
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 1.4e-23 113.6 87 66.7
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 1.4e-23 113.6 87 64.4
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 1.4e-23 113.6 87 66.7
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 4.0e-23 112.1 87 65.5
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 4.0e-23 112.1 87 66.7
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 5.2e-23 111.7 96 62.5
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 6.8e-23 111.3 87 64.4
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 2.0e-22 109.8 87 63.2
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 2.0e-22 109.8 87 63.2
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 3.4e-22 109.0 96 61.5
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 9.9e-22 107.5 87 62.1
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 9.9e-22 107.5 87 62.1
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 9.9e-22 107.5 87 62.1
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 1.3e-21 107.1 87 60.9
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 1.3e-21 107.1 87 60.9
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 1.3e-21 107.1 95 58.9
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 1.3e-21 107.1 96 60.4
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 1.7e-21 106.7 87 62.1
Psat1g220520 Pisum sativum HOM05D003697 ORTHO05D005452 1.7e-21 106.7 96 60.4
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 2.2e-21 106.3 87 62.1
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 2.9e-21 105.9 87 60.9
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 4.9e-21 105.1 87 60.9
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 6.4e-21 104.8 117 44.4
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 6.4e-21 104.8 87 64.4
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 1.1e-20 104.0 87 59.8
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 1.4e-20 103.6 87 59.8
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 1.4e-20 103.6 88 62.5
unitig_749.g14126 Utricularia gibba HOM05D003697 ORTHO05D005452 1.4e-20 103.6 87 62.1
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 1.9e-20 103.2 87 58.6
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 1.6e-19 100.1 87 60.9
SHI16668 Sapria himalayana HOM05D003697 ORTHO05D005452 2.1e-19 99.8 87 57.5
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 2.1e-19 99.8 87 60.9
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 4.6e-19 98.6 87 57.5
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 4.6e-19 98.6 110 47.3
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 4.6e-19 98.6 98 52.0
Psat7g198520 Pisum sativum HOM05D003697 ORTHO05D005452 6.0e-19 98.2 96 57.3
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 8.7e-18 94.4 110 43.6
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 9.6e-17 90.9 95 51.6
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 3.6e-16 89.0 99 48.5
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 4.8e-16 88.6 113 44.2
Psat4g083840 Pisum sativum HOM05D003697 ORTHO05D014541 6.2e-16 88.2 88 56.8
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 8.1e-16 87.8 88 56.8
Cpa.g.sc30.4 Carica papaya HOM05D003697 ORTHO05D005452 2.4e-15 86.3 62 71.0
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 5.3e-15 85.1 95 48.4
TPR.G34678 Trifolium pratense HOM05D003697 ORTHO05D014541 2.1e-11 73.2 85 51.8
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 7.9e-11 71.2 90 43.3
Psat7g199600 Pisum sativum HOM05D003697 ORTHO05D023078 2.3e-10 69.7 72 54.2
Psat5g083120 Pisum sativum HOM05D003697 ORTHO05D002190 8.7e-10 67.8 62 59.7


User provided reference genes

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