Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 0.0e+00 1202.2 616 100.0
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 7.9e-168 594.7 823 47.3
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 6.3e-149 531.9 789 45.8
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 1.3e-125 454.5 748 42.6
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 1.2e-110 404.8 533 49.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 5.4e-108 396.0 659 42.0
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 1.2e-102 378.3 494 48.8
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 3.6e-96 356.7 500 45.4
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 4.7e-96 356.3 722 38.0
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 6.2e-96 355.9 722 37.8
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 9.9e-94 348.6 741 36.8
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 4.9e-93 346.3 738 36.9
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 3.5e-91 340.1 760 36.7
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 3.6e-88 330.1 507 45.2
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 4.0e-87 326.6 704 36.5
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 2.7e-83 313.9 793 34.4
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 5.1e-82 309.7 755 34.8
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 8.7e-82 308.9 712 34.8
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 2.1e-80 304.3 546 41.4
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 9.9e-78 295.4 765 34.4
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 8.4e-77 292.4 306 54.6
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 7.1e-76 289.3 529 41.2
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 7.1e-76 289.3 791 34.0
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 1.6e-75 288.1 708 34.3
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 8.7e-74 282.3 642 36.6
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 6.2e-72 276.2 536 38.2
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 5.3e-71 273.1 673 35.2
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 6.9e-71 272.7 674 34.3
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 7.6e-70 269.2 256 59.4
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.6e-67 261.5 219 60.7
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 3.5e-67 260.4 463 40.6
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 1.9e-65 254.6 522 37.9
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 4.3e-65 253.4 258 57.0
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 7.4e-65 252.7 625 35.0
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 9.6e-65 252.3 490 38.2
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 8.2e-64 249.2 467 39.0
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 1.8e-63 248.1 456 39.0
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 6.9e-63 246.1 473 39.7
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 2.6e-62 244.2 228 57.5
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 2.6e-62 244.2 284 50.4
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 2.9e-61 240.7 214 60.3
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 2.9e-61 240.7 458 38.4
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 1.9e-60 238.0 471 39.7
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 3.5e-59 233.8 482 35.9
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 4.6e-59 233.4 289 48.4
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.0e-58 230.7 255 51.4
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 3.3e-57 227.3 488 37.5
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.2e-54 218.8 414 37.4
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 2.6e-54 217.6 471 35.9
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 1.0e-53 215.7 375 40.0
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 1.0e-53 215.7 214 54.2
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.7e-53 214.9 440 38.0
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 1.9e-52 211.5 309 43.4
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 5.5e-52 209.9 602 32.7
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.2e-51 208.8 752 29.5
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 6.5e-45 186.4 372 36.8
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.1e-33 149.1 297 36.4
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 2.2e-32 144.8 174 46.6
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 3.1e-31 141.0 161 44.1
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.1e-27 128.3 187 40.1
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.8e-26 125.2 140 49.3
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.3e-26 124.8 222 36.0
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.3e-26 124.8 222 36.0
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 8.8e-26 122.9 581 27.2
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.4e-25 120.6 259 34.4
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 3.4e-17 94.4 521 26.9
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 1.0e-13 82.8 142 35.2
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 2.8e-11 74.7 141 35.5
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 1.2e-09 69.3 81 49.4
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 2.6e-09 68.2 46 69.6
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 5.7e-09 67.0 132 31.8
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 1.8e-07 62.0 47 63.8


User provided reference genes

Program Settings