Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 8.9e-187 656.8 323 100.0
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.7e-183 645.2 323 98.1
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.2e-151 540.0 323 81.7
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.5e-149 533.1 325 81.2
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.8e-147 526.2 323 81.4
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 6.7e-142 507.7 323 77.7
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 4.3e-141 505.0 306 81.0
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 5.8e-138 494.6 323 74.3
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.3e-134 483.4 323 72.4
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.8e-134 483.0 323 72.4
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 3.0e-134 482.3 379 66.0
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 3.9e-134 481.9 323 72.1
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 6.7e-134 481.1 363 65.8
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 1.1e-133 480.3 323 72.4
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 4.3e-133 478.4 330 72.4
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 4.3e-133 478.4 392 63.8
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 5.7e-133 478.0 324 74.1
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 1.3e-132 476.9 326 72.1
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 1.3e-132 476.9 323 71.8
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 8.2e-132 474.2 324 72.8
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 6.9e-131 471.1 324 71.9
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 1.5e-130 469.9 328 69.2
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 2.6e-130 469.2 323 71.8
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 4.5e-130 468.4 324 71.6
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.2e-129 466.1 324 71.6
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 3.8e-129 465.3 323 71.8
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.4e-128 463.4 324 71.3
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 7.2e-128 461.1 324 71.9
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 1.2e-127 460.3 338 68.6
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 2.7e-127 459.1 324 69.4
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.6e-127 458.8 323 71.5
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 1.0e-126 457.2 323 70.3
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 1.8e-126 456.4 327 68.8
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.0e-126 455.7 323 70.0
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.9e-125 453.0 324 69.1
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.9e-125 453.0 324 69.4
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 1.9e-125 453.0 325 69.8
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 5.7e-125 451.4 326 69.6
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.6e-124 449.9 324 69.1
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 4.8e-124 448.4 323 69.0
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 4.8e-124 448.4 323 69.0
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 6.3e-124 448.0 324 70.4
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 7.7e-122 441.0 326 70.2
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 5.0e-121 438.3 326 67.8
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 6.5e-121 438.0 341 64.8
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 6.5e-121 438.0 324 66.0
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 6.5e-121 438.0 325 68.3
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 8.5e-121 437.6 323 65.0
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 8.5e-121 437.6 323 65.9
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.1e-120 437.2 325 67.7
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 4.2e-120 435.3 323 67.5
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 4.2e-120 435.3 323 65.3
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 7.2e-120 434.5 323 66.3
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 2.1e-119 433.0 323 65.9
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 7.9e-119 431.0 323 64.4
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 2.3e-118 429.5 324 64.2
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.3e-118 429.5 338 64.8
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 8.8e-118 427.6 324 63.9
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 2.0e-117 426.4 324 66.7
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 2.6e-117 426.0 326 67.8
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 2.6e-117 426.0 323 66.3
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 2.6e-117 426.0 323 65.3
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 5.7e-117 424.9 323 64.7
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 5.7e-117 424.9 323 64.4
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 9.7e-117 424.1 311 66.9
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 1.3e-116 423.7 323 64.1
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 4.8e-116 421.8 323 65.6
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 5.3e-115 418.3 323 64.7
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 6.9e-115 417.9 324 64.2
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.0e-114 416.4 314 66.6
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 7.7e-114 414.5 323 64.4
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 1.3e-113 413.7 323 63.8
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 1.3e-113 413.7 323 65.6
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 2.9e-113 412.5 324 65.1
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 1.4e-112 410.2 324 64.2
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 1.4e-112 410.2 324 64.2
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 3.2e-112 409.1 323 62.2
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 4.2e-112 408.7 307 66.1
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 1.6e-111 406.8 333 60.7
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 4.7e-111 405.2 327 62.1
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 3.0e-110 402.5 324 61.4
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 5.2e-110 401.7 323 61.9
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 6.7e-110 401.4 333 59.5
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 1.5e-109 400.2 323 60.4
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.6e-109 399.4 325 63.1
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 4.4e-109 398.7 349 57.3
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 7.4e-109 397.9 324 60.8
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 4.8e-108 395.2 325 62.5
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 3.1e-107 392.5 359 56.3
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 2.6e-106 389.4 323 63.8
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 3.5e-106 389.0 326 62.6
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 1.3e-105 387.1 308 62.3
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 2.9e-105 386.0 326 62.0
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 3.8e-105 385.6 234 79.1
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 3.8e-105 385.6 368 56.0
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 3.8e-105 385.6 326 60.4
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 1.1e-104 384.0 364 54.9
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 5.5e-104 381.7 326 59.8
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 7.2e-104 381.3 326 60.1
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 6.1e-103 378.3 362 56.4
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 4.0e-102 375.6 324 62.0
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 6.7e-102 374.8 249 72.7
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.6e-101 372.9 327 61.5
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 7.5e-101 371.3 295 64.4
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 6.3e-100 368.2 326 59.2
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 7.0e-99 364.8 285 66.7
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 1.0e-97 360.9 323 60.7
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 1.2e-95 354.0 325 56.0
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 4.7e-95 352.1 346 54.3
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 6.1e-95 351.7 268 65.3
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 4.0e-94 349.0 362 53.0
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 3.4e-93 345.9 324 53.7
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.8e-91 340.1 329 52.0
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 3.5e-90 335.9 221 71.9
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.7e-89 333.6 305 58.0
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.7e-81 307.0 327 51.7
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 8.3e-76 288.1 294 54.8
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 7.0e-75 285.0 261 58.2
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.7e-73 280.4 326 51.8
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 3.3e-72 276.2 308 48.7
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.6e-71 273.9 210 65.7
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 4.0e-70 269.2 211 64.5
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 5.2e-70 268.9 293 50.5
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 1.2e-69 267.7 323 44.6
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.2e-66 257.7 247 53.0
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.5e-66 256.1 170 72.9
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 1.4e-62 244.2 323 44.0
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 5.8e-61 238.8 145 82.8
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 4.6e-58 229.2 172 64.5
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 4.3e-56 222.6 165 67.3
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.7e-52 210.7 257 47.1
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 1.2e-50 204.5 163 64.4
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.1e-50 203.8 165 64.8
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 1.0e-49 201.4 145 68.3
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 1.7e-49 200.7 127 78.0
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 4.3e-48 196.1 151 62.3
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 3.5e-42 176.4 341 34.0
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 1.3e-39 167.9 153 55.6
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 6.9e-38 162.2 310 34.2
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 9.0e-38 161.8 260 33.8
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 6.4e-36 155.6 121 65.3
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 3.3e-32 143.3 120 62.5
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 4.3e-32 142.9 217 36.4
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 2.8e-31 140.2 119 57.1
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.2e-29 134.8 84 76.2
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 5.8e-29 132.5 303 29.4
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.1e-22 111.7 120 52.5
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 1.7e-20 104.4 74 68.9
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 3.8e-20 103.2 74 68.9
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 3.8e-20 103.2 74 68.9
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 8.4e-20 102.1 96 60.4
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 7.9e-18 95.5 88 52.3
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.8e-17 94.4 85 60.0
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 3.0e-17 93.6 77 57.1
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 8.7e-17 92.0 66 60.6
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 9.0e-14 82.0 58 67.2
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 1.2e-13 81.6 61 68.9
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 1.6e-10 71.2 62 61.3
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 6.1e-10 69.3 61 60.7


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