Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.0e-124 450.3 259 100.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.1e-94 350.5 168 100.0
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 6.9e-65 251.5 281 60.9
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 2.6e-64 249.6 332 53.3
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.4e-64 249.2 288 54.9
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 5.8e-64 248.4 189 71.4
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.0e-63 247.7 191 69.6
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.3e-63 247.3 284 52.8
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.7e-63 246.9 281 61.9
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 2.2e-63 246.5 188 70.2
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.9e-63 245.4 189 69.3
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.1e-62 244.2 187 70.6
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.1e-62 244.2 185 71.9
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.9e-62 243.4 281 60.9
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 7.1e-62 241.5 185 71.4
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 3.5e-61 239.2 281 59.4
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 4.6e-61 238.8 283 63.3
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 6.0e-61 238.4 190 67.9
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 1.0e-60 237.7 280 57.9
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.3e-60 237.3 279 53.0
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 1.3e-60 237.3 318 48.7
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.8e-60 236.9 291 53.3
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 1.8e-60 236.9 191 67.5
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.8e-60 236.9 191 67.5
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.8e-60 236.9 191 67.5
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 3.0e-60 236.1 191 67.5
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 3.0e-60 236.1 188 68.6
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.9e-60 235.7 281 59.1
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.1e-59 234.2 188 67.6
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.1e-59 234.2 303 48.8
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.1e-59 234.2 303 49.2
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 1.5e-59 233.8 189 67.2
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.9e-59 233.4 279 56.3
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 1.9e-59 233.4 281 60.9
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 2.5e-59 233.0 313 47.9
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 3.3e-59 232.6 282 63.1
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 3.3e-59 232.6 191 65.4
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 5.7e-59 231.9 190 67.4
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 5.7e-59 231.9 191 67.5
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.3e-58 230.7 281 58.0
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.6e-58 230.3 188 67.6
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 2.8e-58 229.6 281 58.7
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 2.8e-58 229.6 284 60.2
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 4.8e-58 228.8 185 68.1
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 6.3e-58 228.4 297 49.5
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 6.3e-58 228.4 281 58.4
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 1.1e-57 227.6 191 63.9
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.1e-57 227.6 281 56.6
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 1.1e-57 227.6 281 61.2
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 1.4e-57 227.3 191 63.9
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 2.4e-57 226.5 281 61.2
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.4e-57 226.5 288 51.4
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 6.9e-57 224.9 281 58.7
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 6.9e-57 224.9 290 61.0
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.2e-56 224.2 282 53.5
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 2.0e-56 223.4 310 53.5
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 2.0e-56 223.4 188 64.9
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 3.4e-56 222.6 280 57.5
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 5.9e-56 221.9 191 62.8
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 5.9e-56 221.9 330 43.6
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 1.3e-55 220.7 191 62.3
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.3e-55 220.7 290 57.9
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 2.2e-55 219.9 281 60.5
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 2.9e-55 219.5 176 67.6
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 2.9e-55 219.5 185 65.4
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 5.0e-55 218.8 281 47.0
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 8.5e-55 218.0 280 59.6
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.9e-54 216.9 176 66.5
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 1.9e-54 216.9 280 55.7
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 5.5e-54 215.3 280 57.9
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-53 214.2 176 64.8
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.2e-53 214.2 280 57.9
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.1e-53 213.4 319 48.9
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 3.6e-53 212.6 280 57.1
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.6e-53 212.2 175 64.6
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 6.1e-53 211.8 280 54.6
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 1.0e-52 211.1 280 56.8
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 3.9e-52 209.1 308 53.6
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 5.1e-52 208.8 281 57.7
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.1e-51 207.6 274 48.2
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.3e-50 204.1 295 45.4
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 1.8e-49 200.3 220 54.1
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.5e-48 197.2 335 44.2
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 6.5e-47 191.8 169 59.8
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.6e-45 187.2 205 53.7
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 2.1e-45 186.8 188 53.7
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 4.7e-45 185.7 177 57.6
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.8e-44 183.7 159 63.5
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.8e-44 183.7 151 65.6
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 2.0e-43 180.3 196 51.5
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 2.6e-43 179.9 161 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 9.7e-43 177.9 192 50.5
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 9.1e-41 171.4 151 59.6
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 3.5e-40 169.5 208 50.0
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 1.4e-36 157.5 273 50.5
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.4e-36 157.5 200 64.0
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 1.8e-36 157.1 406 33.7
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 5.7e-35 152.1 198 44.9
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.1e-33 147.9 357 32.8
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 1.5e-30 137.5 160 49.4
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.5e-30 136.7 131 59.5
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 4.2e-30 136.0 137 56.2
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.0e-28 129.8 300 35.0
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 4.0e-28 129.4 171 45.0
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 3.1e-25 119.8 107 60.7
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.7e-23 114.0 102 58.8
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 5.0e-23 112.5 99 59.6
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.1e-22 111.3 106 59.4
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 1.5e-22 110.9 78 66.7
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 5.5e-22 109.0 145 48.3
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 2.1e-21 107.1 111 53.2
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 2.3e-20 103.6 92 59.8
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 3.3e-14 83.2 151 55.6
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 7.5e-11 72.0 38 89.5
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 2.4e-09 67.0 33 87.9
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 1.6e-08 64.3 38 78.9
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 2.0e-08 63.9 32 93.8


User provided reference genes

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