Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.2e-188 662.1 336 100.0
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.7e-146 522.3 357 79.0
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-141 506.5 331 81.3
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.4e-137 493.4 348 75.3
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.1e-84 315.5 340 57.9
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.8e-73 280.4 293 56.3
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.9e-71 273.1 297 54.9
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.6e-66 257.3 299 52.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.6e-45 186.0 196 49.5
CSS0007087 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.2e-42 175.3 163 61.3
CSS0015616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.5e-39 165.6 163 60.1
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.6e-37 159.5 292 36.6
CSS0019759 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.9e-36 156.4 163 57.1
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.9e-35 154.1 233 39.1
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.7e-31 141.0 253 33.2
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.1e-29 134.0 243 34.6
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-27 127.9 214 33.2
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.8e-26 122.9 285 31.9
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.9e-25 119.0 219 34.2
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-22 111.7 287 31.4
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.4e-22 111.3 229 30.1
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-22 110.9 159 37.1
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.2e-21 108.2 229 29.7
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.9e-21 105.5 133 47.4
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 7.9e-21 105.5 254 30.7
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.4e-20 104.8 238 31.9
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-20 102.4 218 33.0
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.3e-19 100.1 110 46.4
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.4e-19 99.8 187 35.3
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.7e-18 97.8 174 31.6
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.7e-18 97.8 174 31.6
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.8e-18 97.1 236 28.4
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-18 97.1 145 36.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-18 96.3 214 32.2
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.2e-16 91.7 110 45.5
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.3e-15 88.2 189 31.2
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.3e-15 88.2 188 33.5
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.3e-15 88.2 238 27.7
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.5e-14 84.0 227 27.8
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 5.5e-14 82.8 107 43.9
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-13 80.9 69 58.0
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 8.0e-13 79.0 149 36.2
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.0e-12 78.6 240 26.7
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 3.0e-12 77.0 206 27.2
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 3.0e-12 77.0 85 47.1
CsaV3_2G017350 Cucumis sativus L. HOM05D001963 ORTHO05D001863 5.2e-12 76.3 193 29.5
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 2.0e-11 74.3 112 41.1
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.0e-11 74.3 205 24.9
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.0e-11 74.3 240 28.3
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.0e-11 74.3 190 27.9
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.6e-11 73.9 181 26.5
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-11 73.2 218 28.4
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.4e-11 73.2 204 27.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 5.7e-11 72.8 249 28.9
Migut.F01288 Erythranthe guttata HOM05D000791 ORTHO05D000669 7.4e-11 72.4 215 25.6
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 7.4e-11 72.4 197 24.9
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.3e-10 71.6 128 35.9
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.2e-10 70.9 181 25.4
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 2.2e-10 70.9 198 28.8
Migut.N00810 Erythranthe guttata HOM05D000791 ORTHO05D000669 2.8e-10 70.5 215 24.7
MELO3C032745.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.8e-09 67.8 180 27.2
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.4e-09 67.4 81 43.2
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.4e-09 67.4 81 43.2
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.4e-09 67.4 81 43.2
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.4e-09 67.4 81 43.2
MELO3C029233.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.1e-09 67.0 180 25.0
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.1e-09 66.6 182 25.3
MELO3C029715.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.3e-09 66.2 181 25.4
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.0e-09 65.9 123 47.2
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.0e-09 65.9 123 47.2
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 9.1e-09 65.5 201 26.9
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.1e-09 65.5 72 43.1
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.0e-08 64.3 94 41.5
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-08 64.3 155 29.7
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-08 64.3 155 29.7
MELO3C030815.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.5e-08 63.5 115 30.4
FAN07G2263 Fragaria x ananassa HOM05D011706 ORTHO05D009647 3.5e-08 63.5 226 24.3
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 4.5e-08 63.2 107 40.2
MELO3C033641.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.7e-08 62.4 169 23.7
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.0e-07 62.0 72 40.3
MELO3C028156.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.0e-07 62.0 152 25.7
ECA232G0447 Erigeron canadensis HOM05D008205 ORTHO05D003386 1.3e-07 61.6 128 24.2
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.7e-07 61.2 103 36.9
MELO3C027880.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.2e-07 60.8 178 24.7
MELO3C034846.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.0e-07 59.7 174 25.3
Aqoxy6G01995 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 8.5e-07 58.9 200 25.0
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.5e-07 58.9 72 37.5
MELO3C029550.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.5e-07 58.9 116 28.4
ECA233G1656 Erigeron canadensis HOM05D008205 ORTHO05D003386 8.5e-07 58.9 128 23.4
FvH4_1g01701 Fragaria vesca HOM05D002291 ORTHO05D000222 8.5e-07 58.9 167 26.9
FAN19G1637 Fragaria x ananassa HOM05D002291 ORTHO05D000222 8.5e-07 58.9 167 26.9
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 8.5e-07 58.9 167 26.9
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 8.5e-07 58.9 125 28.8
Aqoxy2G02170 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 1.1e-06 58.5 200 24.5
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 1.1e-06 58.5 166 24.7
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.5e-06 58.2 72 37.5
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.5e-06 58.2 72 37.5
MELO3C034953.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.5e-06 58.2 127 29.1
MELO3C030283.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.9e-06 57.8 120 25.8
ECA247G1621 Erigeron canadensis HOM05D008205 ORTHO05D003386 1.9e-06 57.8 128 22.7
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 2.5e-06 57.4 210 26.7
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 2.5e-06 57.4 210 26.7
CSS0027658 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.5e-06 57.4 52 61.5
ECA238G2911 Erigeron canadensis HOM05D008205 ORTHO05D003386 2.5e-06 57.4 128 23.4
ECA233G2447 Erigeron canadensis HOM05D008205 ORTHO05D003386 4.2e-06 56.6 128 25.0
ECA246G2498 Erigeron canadensis HOM05D006441 ORTHO05D008203 4.2e-06 56.6 128 25.0
ECA247G1431 Erigeron canadensis HOM05D008205 ORTHO05D003386 4.2e-06 56.6 128 23.4
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 9.4e-06 55.5 151 25.2
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-06 55.5 165 27.9


User provided reference genes

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