Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037177 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.2e-135 486.5 241 100.0
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.1e-96 355.1 212 83.5
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 9.2e-96 354.0 212 83.5
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 9.2e-96 354.0 212 83.5
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 8.6e-94 347.4 212 82.5
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.2e-92 343.6 212 82.5
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 1.7e-89 333.2 212 78.8
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 3.7e-89 332.0 212 78.8
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 1.1e-88 330.5 211 78.7
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.1e-80 303.9 194 79.9
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 3.2e-80 302.4 212 73.1
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 3.2e-80 302.4 212 73.1
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.6e-79 300.1 211 71.6
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 4.6e-79 298.5 211 72.0
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 1.7e-78 296.6 212 68.9
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 3.0e-78 295.8 211 70.6
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 1.1e-77 293.9 212 69.8
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 1.9e-77 293.1 210 71.4
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 7.3e-77 291.2 212 69.8
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 9.6e-77 290.8 211 69.7
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 1.6e-76 290.0 210 69.5
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 1.6e-76 290.0 213 70.0
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 2.8e-76 289.3 211 69.2
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 2.8e-76 289.3 211 69.2
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 3.6e-76 288.9 211 69.2
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 6.2e-76 288.1 211 68.7
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 6.2e-76 288.1 212 69.8
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 8.1e-76 287.7 211 68.7
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 1.1e-75 287.3 211 69.2
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.8e-75 286.6 211 68.2
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 6.8e-75 284.6 211 70.1
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 1.2e-74 283.9 210 69.5
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 1.2e-74 283.9 211 68.2
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 2.0e-74 283.1 211 68.7
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 2.0e-74 283.1 211 68.7
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 2.6e-74 282.7 212 68.9
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 5.8e-74 281.6 211 68.2
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 5.8e-74 281.6 200 74.5
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 7.6e-74 281.2 212 67.5
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 1.7e-73 280.0 211 68.7
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.7e-73 280.0 211 66.8
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 1.7e-73 280.0 211 67.8
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 2.2e-73 279.6 210 68.1
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 2.2e-73 279.6 207 68.6
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 4.9e-73 278.5 211 66.8
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 6.4e-73 278.1 211 68.2
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 8.4e-73 277.7 213 66.7
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 3.2e-72 275.8 205 69.8
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 5.4e-72 275.0 209 67.9
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 5.4e-72 275.0 209 68.4
Nitab4.5_0001514g0020 Nicotiana tabacum HOM05D004263 ORTHO05D004931 9.3e-72 274.2 209 68.9
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 1.2e-71 273.9 212 67.0
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 1.6e-71 273.5 209 67.9
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 1.6e-71 273.5 209 67.9
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 4.6e-71 271.9 211 66.4
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 4.6e-71 271.9 206 68.4
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 7.8e-71 271.2 209 67.5
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 1.0e-70 270.8 211 66.8
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 1.0e-70 270.8 209 67.0
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 1.7e-70 270.0 211 66.8
Oeu001695.1 Olea europaea HOM05D004263 ORTHO05D004931 1.7e-70 270.0 211 66.8
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 3.0e-70 269.2 209 67.0
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 5.1e-70 268.5 208 67.8
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 6.6e-70 268.1 212 67.5
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 6.6e-70 268.1 207 66.7
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 8.7e-70 267.7 207 66.2
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 8.7e-70 267.7 215 65.1
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 8.7e-70 267.7 212 65.1
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 2.5e-69 266.2 208 67.8
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 3.3e-69 265.8 197 71.6
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 3.3e-69 265.8 208 65.9
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 9.6e-69 264.2 215 62.8
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 1.3e-68 263.8 207 67.1
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 3.6e-68 262.3 211 62.6
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 3.6e-68 262.3 212 63.2
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 8.1e-68 261.2 212 64.2
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 1.8e-67 260.0 212 63.7
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 1.2e-66 257.3 209 60.8
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.5e-66 256.9 209 61.7
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.5e-66 256.9 212 63.7
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 5.8e-66 255.0 207 62.3
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 5.8e-66 255.0 207 62.3
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 7.6e-66 254.6 207 62.3
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 1.3e-65 253.8 207 61.8
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 1.7e-65 253.4 207 61.4
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 1.7e-65 253.4 206 62.1
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 3.8e-65 252.3 207 61.4
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 4.9e-65 251.9 206 61.7
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 6.4e-65 251.5 207 62.3
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 6.4e-65 251.5 211 59.7
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 1.1e-64 250.8 207 62.3
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 1.1e-64 250.8 207 62.3
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 1.4e-64 250.4 207 60.4
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 1.9e-64 250.0 206 61.2
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 1.9e-64 250.0 209 59.8
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 2.4e-64 249.6 211 63.0
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 7.1e-64 248.1 207 61.8
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 7.1e-64 248.1 207 61.8
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 7.1e-64 248.1 207 59.9
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 9.3e-64 247.7 207 61.8
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 1.6e-63 246.9 211 60.7
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 1.5e-61 240.4 210 59.0
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 7.4e-61 238.0 207 59.9
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 9.0e-59 231.1 207 58.0
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 4.2e-48 195.7 161 65.8
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 7.9e-47 191.4 211 51.2
Atru.chr5.268 Acer truncatum HOM05D004263 ORTHO05D004931 4.5e-42 175.6 153 58.2
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 1.3e-41 174.1 211 46.9
Nitab4.5_0000025g0510 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.4e-40 170.6 108 76.9
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 7.2e-40 168.3 212 44.3
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 2.1e-39 166.8 113 71.7
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 2.7e-39 166.4 215 45.1
SEGI_15765 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 1.1e-35 154.5 113 67.3
SEGI_30776 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 2.4e-35 153.3 135 61.5
Atru.chr3.3152 Acer truncatum HOM05D004263 ORTHO05D004931 2.6e-34 149.8 128 58.6
CAN.G224.15 Capsicum annuum HOM05D004263 ORTHO05D004931 7.4e-29 131.7 88 73.9
CAN.G666.1 Capsicum annuum HOM05D004263 ORTHO05D004931 4.5e-26 122.5 86 70.9
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 2.9e-25 119.8 218 33.9
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 1.5e-21 107.5 89 61.8
CBR_g50947 Chara braunii HOM05D004263 ORTHO05D004931 6.3e-20 102.1 124 43.5
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 9.1e-19 98.2 86 58.1
unitig_0.g1434 Utricularia gibba HOM05D004263 ORTHO05D004931 2.7e-15 86.7 77 54.5
SEGI_34242 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 4.0e-14 82.8 87 47.1
Cre07.g328550 Chlamydomonas reinhardtii HOM05D004263 ORTHO05D004931 2.0e-13 80.5 205 29.8
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 6.5e-09 65.5 205 22.9
PRCOL_00001544 Prasinoderma coloniale HOM05D004263 ORTHO05D004931 3.6e-07 59.7 207 23.2


User provided reference genes

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