Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.3e-128 462.2 230 100.0
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.5e-111 405.6 223 91.5
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.3e-110 401.0 206 96.6
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.8e-109 399.4 223 90.6
CSS0038207 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.9e-109 397.5 233 87.1
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.9e-101 370.9 233 84.1
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-100 370.2 209 89.5
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-40 168.3 196 48.0
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-36 154.8 202 46.5
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-34 148.7 205 46.8
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-33 146.7 207 45.4
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-33 146.0 200 42.5
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-26 124.0 208 39.9
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-24 117.9 200 38.5
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-23 112.8 194 41.2
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 4.6e-20 102.4 239 35.6
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 3.4e-15 86.3 154 33.1
Dinv13014 Davidia involucrata HOM05D011494 ORTHO05D016144 9.9e-15 84.7 145 36.6
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-14 84.0 163 41.1
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-14 82.8 152 40.8
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 5.4e-13 79.0 147 33.3
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-13 79.0 147 35.4
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-13 79.0 147 33.3
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 5.4e-13 79.0 147 33.3
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 5.4e-13 79.0 147 33.3
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 9.3e-13 78.2 147 33.3
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 9.3e-13 78.2 147 31.3
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 9.3e-13 78.2 156 37.2
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-12 77.8 147 32.7
TWI63G0592 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.6e-12 77.4 140 35.7
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-12 76.6 188 28.7
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 1.0e-11 74.7 180 36.7
TWI09G0132 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-11 74.7 138 34.1
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 3.9e-11 72.8 209 29.2
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 5.1e-11 72.4 164 32.9
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 6.7e-11 72.0 247 27.9
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.7e-11 72.0 189 31.7
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.1e-10 71.2 166 31.9
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.1e-10 71.2 164 32.3
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 2.5e-10 70.1 77 45.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 2.5e-10 70.1 77 44.2
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 2.5e-10 70.1 77 44.2
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-10 69.7 163 29.4
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 4.3e-10 69.3 70 45.7
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 7.4e-10 68.6 77 45.5
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.4e-10 68.6 166 32.5
TWI31G0044 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.4e-10 68.6 139 33.8
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 9.6e-10 68.2 77 42.9
TWI32G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.6e-10 68.2 139 33.8
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-09 67.8 77 45.5
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 1.3e-09 67.8 97 39.2
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 2.8e-09 66.6 137 34.3
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 2.8e-09 66.6 140 32.1
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 4.8e-09 65.9 77 41.6
TWI63G1229 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.1e-09 65.1 138 29.7
TWI81G0457 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.1e-09 65.1 138 31.2
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.1e-08 64.7 65 47.7
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.1e-08 64.7 65 47.7
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.1e-08 64.7 69 46.4
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-08 64.3 185 30.8
TWI32G0319 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-08 64.3 83 38.6
TWI63G1291 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-08 64.3 92 40.2
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-08 63.9 190 28.9
TWI79G1342 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 1.8e-08 63.9 272 26.1
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.4e-08 63.5 65 46.2
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.4e-08 63.5 69 46.4
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 2.4e-08 63.5 126 31.7
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-08 63.2 154 31.8
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-08 63.2 210 29.5
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.1e-08 63.2 173 32.9
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 4.0e-08 62.8 197 31.5
PSO170G4224 Papaver somniferum HOM05D000004 ORTHO05D000224 4.0e-08 62.8 149 28.2
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.3e-08 62.4 69 44.9
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.3e-08 62.4 169 32.5
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.9e-08 62.0 56 53.6
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.9e-08 62.0 77 45.5
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 6.9e-08 62.0 71 40.8
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 9.0e-08 61.6 70 47.1
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-08 61.6 194 29.9
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-08 61.6 212 28.8
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 9.0e-08 61.6 70 47.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.0e-08 61.6 85 42.4
CSS0009469 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D000034 1.2e-07 61.2 54 51.9
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.2e-07 61.2 80 40.0
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 1.2e-07 61.2 158 29.1
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.5e-07 60.8 56 51.8
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-07 60.5 207 30.0
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-07 60.5 168 28.6
Ca_28406_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-07 60.5 168 28.0
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.0e-07 60.5 76 43.4
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.0e-07 60.5 158 29.1
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 2.6e-07 60.1 139 30.2
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-07 60.1 212 28.8
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 2.6e-07 60.1 75 34.7
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-07 59.7 185 29.2
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.4e-07 59.7 69 42.0
Ca_04624_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.4e-07 59.7 150 29.3
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 3.4e-07 59.7 97 37.1
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 3.4e-07 59.7 127 27.6
PSO832G2581 Papaver somniferum HOM05D000004 ORTHO05D000224 3.4e-07 59.7 159 28.3
Rhsim09G0012700 Rhododendron simsii HOM05D011494 ORTHO05D016144 3.4e-07 59.7 160 32.5
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-07 59.3 188 28.7
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-07 59.3 155 29.7
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.5e-07 59.3 195 31.8
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.8e-07 58.9 191 28.8
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.8e-07 58.9 179 27.4
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-07 58.9 93 35.5
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-07 58.5 212 27.8
Ca_23948_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.6e-07 58.5 83 38.6
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.6e-07 58.5 82 39.0
TWI63G1028 Tripterygium wilfordii HOM05D011603 ORTHO05D000034 7.6e-07 58.5 228 23.7
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-06 58.2 66 47.0
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.0e-06 58.2 56 51.8
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-06 58.2 66 47.0
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-06 58.2 104 32.7
PSO700G0012 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-06 58.2 163 29.4
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 191 28.3
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 191 28.3
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 191 28.3
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.3e-06 57.8 188 29.8
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 1.3e-06 57.8 115 37.4
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-06 57.4 205 29.3
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 1.7e-06 57.4 58 53.4
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 2.2e-06 57.0 172 27.3
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.9e-06 56.6 172 29.7
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.9e-06 56.6 70 41.4
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.9e-06 56.6 147 32.0
MD02G1270300 Malus domestica HOM05D000004 ORTHO05D000224 2.9e-06 56.6 141 32.6
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.9e-06 56.6 243 26.7
Thecc.09G221700 Theobroma cacao HOM05D010356 ORTHO05D000034 2.9e-06 56.6 176 26.7
Rhsim11G0010200 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-06 56.2 188 27.1
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.9e-06 55.8 65 41.5
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 4.9e-06 55.8 192 27.1
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 4.9e-06 55.8 80 38.8
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 4.9e-06 55.8 82 39.0
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-06 55.5 191 28.3
PSO339G2805 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-06 55.5 199 26.1
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 8.4e-06 55.1 163 25.8
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 8.4e-06 55.1 163 25.8
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-06 55.1 66 43.9
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-06 55.1 171 27.5
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 8.4e-06 55.1 164 30.5
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 8.4e-06 55.1 154 31.8


User provided reference genes

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