Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.5e-104 382.1 191 100.0
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.0e-77 292.7 191 75.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 5.8e-77 291.2 191 73.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.9e-76 288.9 191 74.3
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.6e-74 281.6 190 72.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 6.6e-73 277.7 194 73.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.5e-72 275.8 192 72.9
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.5e-72 275.8 192 72.9
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.4e-70 270.0 192 71.4
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 6.9e-70 267.7 191 67.0
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.5e-69 266.5 191 66.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.6e-69 265.8 191 66.5
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.4e-69 265.4 191 66.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 3.4e-69 265.4 191 70.2
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 5.8e-69 264.6 191 67.0
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 7.6e-69 264.2 188 67.0
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.7e-68 263.1 191 68.6
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.7e-68 263.1 191 66.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.4e-67 259.2 192 67.2
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 9.3e-67 257.3 191 67.0
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.6e-66 256.5 191 64.9
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.6e-66 256.5 191 64.4
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.1e-66 256.1 197 66.0
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 4.6e-66 255.0 188 67.0
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 7.9e-66 254.2 192 66.1
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.0e-65 253.8 197 64.5
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.3e-65 253.4 192 66.1
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.0e-65 252.3 192 67.7
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 6.7e-65 251.1 192 66.7
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-64 250.4 191 61.8
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.9e-64 249.6 192 66.1
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 2.5e-64 249.2 193 65.8
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.6e-64 248.1 192 65.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 5.6e-64 248.1 190 65.8
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 7.4e-64 247.7 188 66.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 7.4e-64 247.7 197 64.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.3e-63 246.9 192 65.6
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.8e-63 245.7 194 64.9
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 4.8e-63 245.0 194 63.4
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.2e-63 244.6 192 65.6
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.4e-62 243.4 192 64.6
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.8e-62 243.0 193 62.2
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 3.1e-62 242.3 191 61.3
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 4.0e-62 241.9 198 63.6
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.2e-61 240.4 192 64.6
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.0e-61 239.6 193 64.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 2.0e-61 239.6 192 64.1
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 2.0e-61 239.6 190 64.2
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 2.6e-61 239.2 185 62.7
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 4.5e-61 238.4 192 63.5
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 5.8e-61 238.0 192 64.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.8e-61 238.0 192 62.5
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.8e-61 238.0 193 64.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 7.6e-61 237.7 188 64.4
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 7.6e-61 237.7 192 64.1
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 7.6e-61 237.7 192 62.5
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 9.9e-61 237.3 192 62.0
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 9.9e-61 237.3 192 62.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.3e-60 236.9 191 60.2
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.3e-60 236.9 192 62.0
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.7e-60 236.5 192 62.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.7e-60 236.5 192 62.5
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.7e-60 236.5 193 63.7
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.1e-59 233.8 192 60.9
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.1e-59 233.8 192 62.0
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.4e-59 233.4 189 64.0
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.9e-59 233.0 192 64.1
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 2.4e-59 232.6 192 61.5
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 9.3e-59 230.7 189 63.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.6e-58 229.9 189 61.9
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 3.5e-58 228.8 253 49.4
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 4.6e-58 228.4 193 59.6
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.0e-57 227.3 161 71.4
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.3e-57 226.1 191 60.7
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 3.0e-57 225.7 198 60.1
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.9e-57 225.3 225 52.4
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 3.9e-57 225.3 190 60.5
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 5.1e-57 224.9 192 62.0
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 6.7e-57 224.6 186 60.8
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 8.7e-57 224.2 190 60.0
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.7e-57 224.2 190 60.0
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-56 222.6 190 59.5
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.3e-56 222.2 190 59.5
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.6e-56 221.5 162 67.9
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 9.6e-56 220.7 192 58.9
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.7e-55 218.8 193 60.6
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.4e-54 216.9 190 59.5
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.8e-54 216.5 176 63.6
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.4e-54 216.1 191 58.6
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 9.3e-51 204.1 163 63.8
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.8e-49 199.9 153 63.4
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 6.7e-49 198.0 143 62.2
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 8.7e-49 197.6 167 58.1
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.9e-48 196.4 144 63.2
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 7.4e-48 194.5 191 55.0
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.6e-47 193.4 193 58.0
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.1e-47 193.0 142 67.6
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 2.8e-47 192.6 147 67.3
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.6e-42 175.6 163 54.0
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 6.3e-39 164.9 133 60.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 5.5e-35 151.8 191 46.1
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 2.0e-32 143.3 184 47.8
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.7e-31 140.2 191 43.5
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 4.8e-31 138.7 185 44.3
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 2.0e-29 133.3 89 68.5
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.0e-28 128.6 96 64.6
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.4e-27 124.4 137 45.3
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 2.1e-26 123.2 164 37.2
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.0e-25 119.4 103 55.3
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 2.6e-24 116.3 94 56.4
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 8.2e-23 111.3 166 36.7
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 8.2e-23 111.3 90 64.4
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 5.3e-22 108.6 170 36.5
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.9e-20 102.8 78 69.2
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 6.5e-20 101.7 89 60.7
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 4.0e-17 92.4 68 69.1
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.8e-12 75.9 96 53.1
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 7.2e-11 71.6 100 44.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 4.7e-10 68.9 94 35.1
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 6.3e-07 58.5 49 63.3
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 1.4e-06 57.4 46 58.7
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 9.1e-06 54.7 32 81.2


User provided reference genes

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