Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1709.9 891 100.0
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1698.7 891 99.4
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1316.2 907 78.4
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1315.4 903 78.7
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 0.0e+00 1315.1 912 77.0
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1305.0 907 76.0
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1295.8 906 77.2
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1293.5 906 77.0
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 0.0e+00 1223.0 906 72.8
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 0.0e+00 1214.5 887 74.6
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1144.0 906 68.0
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1129.4 907 67.0
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 0.0e+00 1125.5 906 68.8
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 0.0e+00 1122.1 902 68.0
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 0.0e+00 1118.6 903 69.1
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1116.7 906 66.2
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 0.0e+00 1114.4 905 67.6
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1112.8 782 77.7
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1112.1 903 67.8
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 0.0e+00 1098.6 903 68.7
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 0.0e+00 1092.4 903 66.9
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 0.0e+00 1088.2 906 66.0
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 6.1e-312 1073.5 914 64.0
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 6.1e-312 1073.5 913 64.7
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.8e-311 1072.4 913 64.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.4e-311 1072.0 909 64.7
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 4.3e-311 1071.2 910 65.4
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.9e-308 1062.4 910 64.5
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.8e-307 1058.5 910 64.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 2.0e-305 1052.4 905 64.8
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 8.4e-304 1047.0 888 65.9
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 9.3e-303 1043.5 910 64.2
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.9e-301 1038.1 910 64.0
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 3.4e-297 1025.0 869 67.2
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 1.7e-296 1022.7 909 62.9
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 3.8e-296 1021.5 870 66.3
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.1e-294 1015.8 910 63.7
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.0e-293 1013.4 905 62.1
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 5.1e-293 1011.1 908 63.7
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.3e-291 1006.5 867 66.0
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.2e-289 1000.0 906 61.6
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.1e-287 993.4 898 62.0
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 2.5e-287 992.3 906 63.6
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.0e-285 986.9 912 60.9
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 1.5e-284 983.0 907 61.3
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 2.8e-283 978.8 907 61.0
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 2.8e-283 978.8 904 62.4
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.1e-282 976.9 910 61.9
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.5e-281 973.0 919 59.2
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.5e-281 971.5 909 62.5
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.2e-278 963.4 909 60.7
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 3.3e-276 955.3 907 59.6
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 7.4e-276 954.1 907 60.6
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 9.7e-276 953.7 896 60.2
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.2e-275 952.6 920 59.5
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.7e-275 951.8 905 61.5
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.1e-274 950.3 905 61.5
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 2.4e-274 949.1 920 59.2
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 7.0e-274 947.6 899 60.8
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 9.1e-274 947.2 908 60.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 7.7e-273 944.1 924 61.1
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.9e-272 942.2 924 61.0
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.1e-271 940.3 804 66.8
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 4.2e-271 938.3 804 66.7
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.2e-271 938.3 896 60.9
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 5.5e-271 937.9 896 60.8
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.2e-270 936.8 921 59.9
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 2.1e-270 936.0 910 59.1
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.1e-270 936.0 896 60.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 8.0e-270 934.1 898 61.1
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 2.3e-269 932.6 889 60.6
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 3.0e-269 932.2 919 59.1
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 3.0e-269 932.2 892 58.6
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 5.2e-269 931.4 903 60.7
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.5e-268 929.9 907 60.1
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.3e-267 926.8 909 60.9
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.3e-267 926.8 909 61.3
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.4e-266 923.3 909 60.5
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 9.1e-266 920.6 807 65.4
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.2e-265 920.2 905 58.7
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 7.7e-265 917.5 893 59.2
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.1e-263 913.7 916 56.6
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.9e-263 912.9 889 56.7
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.7e-262 909.1 908 60.7
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.2e-259 899.4 887 60.4
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.3e-259 897.9 908 59.6
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.4e-258 896.7 914 58.0
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 3.5e-257 892.1 905 58.0
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 3.8e-256 888.6 875 61.1
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.2e-252 877.1 866 59.7
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 1.5e-252 876.7 906 57.4
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 9.8e-252 874.0 888 59.7
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 1.7e-251 873.2 888 59.7
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 8.6e-248 860.9 847 58.1
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.1e-247 860.5 867 59.1
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 1.6e-246 856.7 866 58.1
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 3.0e-245 852.4 909 58.3
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 2.6e-244 849.4 913 57.2
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 6.3e-243 844.7 850 60.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.4e-242 842.8 869 60.1
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 3.2e-242 842.4 870 58.3
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 9.5e-239 830.9 906 57.0
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 2.0e-236 823.2 912 52.0
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 4.9e-235 818.5 908 55.5
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 6.4e-235 818.1 911 53.3
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-233 813.5 912 55.4
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.9e-232 808.9 905 54.5
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.1e-231 807.4 868 55.4
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 2.9e-227 792.7 852 55.0
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 7.8e-225 784.6 852 56.1
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.4e-221 773.9 780 57.6
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.9e-219 765.4 861 54.7
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.2e-217 760.8 902 52.5
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 1.7e-216 756.9 735 60.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.2e-214 750.7 903 51.2
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 4.0e-213 745.7 903 50.3
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.5e-212 743.8 902 51.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 4.9e-211 738.8 905 51.2
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.4e-210 737.3 936 50.6
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 7.3e-207 724.9 912 49.6
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.2e-203 713.4 886 50.7
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.1e-202 711.1 851 51.4
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.0e-200 704.5 889 50.1
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 9.6e-199 698.0 918 51.1
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 2.4e-197 693.3 918 50.9
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 5.3e-197 692.2 856 52.9
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.2e-196 691.0 881 51.3
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.5e-196 690.6 885 49.6
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 5.6e-191 672.2 880 49.7
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 2.0e-188 663.7 796 52.9
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 7.1e-186 655.2 879 48.8
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 9.3e-186 654.8 917 46.8
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 2.1e-185 653.7 879 49.4
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 3.5e-185 652.9 879 48.7
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 6.0e-185 652.1 866 49.2
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 5.1e-184 649.0 893 48.6
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 6.7e-184 648.7 866 48.8
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.5e-183 647.5 891 48.8
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 6.5e-179 632.1 922 47.4
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.5e-178 629.0 778 50.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 2.3e-176 623.6 767 53.3
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 3.9e-176 622.9 889 47.7
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 3.1e-173 613.2 852 49.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 1.6e-169 600.9 925 45.7
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 2.1e-169 600.5 849 47.2
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 4.6e-169 599.4 922 46.0
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 1.8e-168 597.4 772 51.0
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.2e-158 563.9 749 51.0
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.0e-151 540.8 908 43.9
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.9e-139 500.4 644 50.5
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 9.4e-138 495.4 901 42.8
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 9.1e-133 478.8 459 61.0
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.1e-130 471.9 918 40.3
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 3.3e-122 443.7 758 44.1
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 9.2e-117 425.6 909 37.2
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 6.0e-116 422.9 406 61.8
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.3e-114 417.2 943 38.3
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 9.5e-114 415.6 937 38.6
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 8.1e-113 412.5 910 35.8
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 7.5e-111 406.0 936 37.6
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.4e-109 401.7 936 38.0
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.0e-107 395.6 936 38.0
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 4.0e-96 357.1 887 35.5
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.7e-86 325.1 1003 32.8
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.7e-83 315.1 968 33.0
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 3.1e-80 304.3 366 49.2
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 7.1e-77 293.1 312 50.6
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.3e-70 272.3 405 46.2
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.4e-69 268.9 378 47.1
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 5.5e-69 266.9 512 40.4
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 8.2e-65 253.1 358 44.4
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.8e-62 244.2 297 48.5
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.1e-59 233.8 298 48.7
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.1e-58 232.6 258 53.9
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 2.6e-55 221.5 365 40.8
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.6e-52 212.2 336 41.1
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 3.9e-51 207.6 262 60.3
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.3e-50 204.1 804 28.4
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.6e-47 194.9 310 40.3
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.5e-45 187.2 176 54.5
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.0e-43 183.0 97 96.9
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.2e-39 169.5 182 54.9
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.5e-21 107.5 155 43.2
SEGI_26240 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.0e-15 89.0 359 27.0
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 4.6e-07 61.2 70 48.6


User provided reference genes

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