Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 3.0e-249 864.8 455 100.0
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.2e-125 454.1 464 61.2
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.8e-124 448.4 479 61.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.2e-115 421.0 491 56.8
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 3.1e-113 412.9 437 61.6
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 5.6e-110 402.1 457 57.8
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.4e-84 317.8 391 54.5
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.5e-78 297.0 449 49.2
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.8e-68 264.2 489 42.9
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 5.8e-67 259.2 478 43.5
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.0e-59 234.2 401 45.6
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.6e-59 233.8 459 42.5
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 6.4e-58 229.2 445 42.0
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.2e-56 224.9 452 41.8
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.1e-56 224.2 391 43.7
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 2.1e-56 224.2 400 44.0
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.5e-56 223.4 483 40.0
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.3e-55 220.7 476 41.2
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 3.0e-55 220.3 429 43.4
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.5e-54 218.0 390 43.3
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.6e-53 214.5 397 44.3
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 2.8e-53 213.8 452 41.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.0e-52 209.9 453 40.0
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.3e-52 209.5 465 38.9
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.5e-51 208.0 444 41.0
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.6e-51 207.2 467 40.0
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.3e-50 204.9 444 41.0
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 8.4e-50 202.2 377 44.6
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.7e-48 197.2 453 40.4
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 1.8e-47 194.5 517 37.9
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 2.3e-47 194.1 437 39.6
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.9e-46 191.0 345 44.1
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.5e-46 190.7 434 39.9
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.5e-46 190.7 477 38.8
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 7.4e-46 189.1 379 42.7
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.2e-45 187.6 379 43.0
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 8.2e-45 185.7 373 43.2
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.8e-44 184.5 327 46.2
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.8e-44 184.5 327 46.2
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.0e-42 178.7 446 38.8
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.6e-40 171.4 385 40.3
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 2.2e-37 161.0 485 35.1
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.2e-34 151.0 256 43.0
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.5e-33 147.5 429 35.2
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.7e-32 144.1 432 34.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.4e-31 141.7 292 39.4
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.3e-31 141.0 386 36.3
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 2.0e-30 137.9 500 30.4
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.6e-30 137.5 347 35.4
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.7e-29 134.8 437 35.2
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.7e-29 134.8 319 37.0
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 2.2e-29 134.4 480 31.2
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.4e-28 131.7 285 37.9
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 2.4e-28 131.0 384 36.7
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 7.7e-27 125.9 259 39.4
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 4.2e-25 120.2 534 28.7
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 5.5e-25 119.8 465 29.9
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 7.2e-25 119.4 483 29.6
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 9.4e-25 119.0 426 34.7
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 3.0e-23 114.0 387 35.1
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 5.2e-23 113.2 380 31.8
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 5.7e-22 109.8 390 33.1
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 9.7e-22 109.0 371 32.1
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 2.8e-21 107.5 255 41.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 8.2e-21 105.9 492 30.3
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.8e-20 104.8 510 29.2
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.1e-20 104.0 393 28.8
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 5.3e-20 103.2 477 30.2
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 7.0e-20 102.8 457 30.0
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.2e-19 102.1 414 33.1
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.6e-19 101.7 418 31.8
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 2.0e-19 101.3 500 29.4
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.0e-18 99.0 342 33.3
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 1.0e-18 99.0 492 28.3
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 5.2e-15 86.7 469 26.2
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 2.0e-14 84.7 99 48.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 2.8e-13 80.9 400 27.0
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.7e-08 64.3 80 43.8
Mapoly0016s0066 Marchantia polymorpha HOM05D020562 ORTHO05D030110 6.8e-07 59.7 80 40.0
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 1.2e-06 58.9 64 43.8


User provided reference genes

Program Settings