Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-112 409.8 200 100.0
CSS0048899 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.1e-57 224.2 210 59.0
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.0e-53 211.1 208 55.8
CSS0034453 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-52 209.5 202 55.9
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-30 136.7 191 41.4
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.3e-28 129.8 188 39.9
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-27 127.1 188 39.4
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-23 114.0 183 38.3
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-23 114.0 160 36.2
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.6e-23 111.3 187 37.4
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-22 110.9 187 37.4
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-22 110.5 187 37.4
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.5e-22 109.8 131 41.2
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.5e-22 107.8 132 44.7
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-21 107.1 158 39.9
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 4.7e-21 105.5 185 35.7
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.4e-20 104.0 183 36.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.0e-20 102.4 122 40.2
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.9e-20 101.3 182 36.8
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 8.9e-20 101.3 185 35.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.0e-19 100.1 122 39.3
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.6e-19 99.8 206 31.6
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-19 99.8 129 43.4
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.5e-19 98.2 212 33.5
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.5e-19 98.2 132 39.4
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.5e-19 98.2 132 39.4
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.3e-18 97.4 132 38.6
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.4e-18 95.1 175 34.9
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-17 94.4 122 41.8
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.2e-17 91.3 163 38.0
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.2e-16 90.9 150 38.0
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-16 90.1 168 31.5
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 3.9e-15 85.9 129 39.5
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.1e-15 85.5 210 30.0
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.6e-15 84.7 189 28.6
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.6e-14 82.0 122 35.2
CSS0016507 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.5e-14 81.3 122 41.0
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 9.5e-14 81.3 151 35.8
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 1.2e-13 80.9 208 28.8
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.8e-13 79.7 160 34.4
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 3.6e-13 79.3 118 36.4
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.6e-13 79.3 131 36.6
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 4.7e-13 79.0 106 40.6
Rhsim03G0007600 Rhododendron simsii HOM05D033359 ORTHO05D007254 4.7e-13 79.0 178 24.7
vmacro21511 Vaccinium macrocarpon HOM05D000235 ORTHO05D000147 4.7e-13 79.0 192 29.7
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 6.2e-13 78.6 118 36.4
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-12 77.8 159 33.3
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-12 77.4 122 35.2
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 1.8e-12 77.0 94 39.4
CSS0000654 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-12 76.6 149 30.2
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.4e-12 76.6 129 33.3
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.9e-12 74.7 208 30.3
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-11 74.3 150 36.0
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.5e-11 73.9 103 38.8
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 1.5e-11 73.9 99 43.4
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 3.4e-11 72.8 118 33.1
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 9.9e-11 71.2 120 33.3
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 2.9e-10 69.7 181 29.8
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-10 69.3 87 41.4
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.4e-10 68.6 82 43.9
Aa31LG9G1700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-10 68.2 198 25.3
Lj4g0008388 Lotus japonicus HOM05D000003 ORTHO05D007254 1.1e-09 67.8 203 30.5
Lj5g0027405 Lotus japonicus HOM05D000003 ORTHO05D007254 1.1e-09 67.8 211 28.0
QL03p021598 Quercus lobata HOM05D014678 ORTHO05D017106 1.1e-09 67.8 128 35.9
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-09 67.4 118 33.1
Lj6g0001178 Lotus japonicus HOM05D000003 ORTHO05D000004 3.2e-09 66.2 211 28.0
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.1e-09 65.9 155 30.3
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 4.1e-09 65.9 115 34.8
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 7.1e-09 65.1 58 55.2
COL.COLO4_20392 Corchorus olitorius HOM05D000003 ORTHO05D000167 7.1e-09 65.1 187 25.1
Lj2g0001686 Lotus japonicus HOM05D000003 ORTHO05D007254 1.2e-08 64.3 211 27.0
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 1.2e-08 64.3 194 29.9
Lj4g0016137 Lotus japonicus HOM05D000003 ORTHO05D000004 1.6e-08 63.9 128 30.5
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-08 63.9 211 28.4
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-08 63.5 144 33.3
Rhsim09G0146400 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.1e-08 63.5 132 30.3
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 2.7e-08 63.2 136 30.9
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 2.7e-08 63.2 102 36.3
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 2.7e-08 63.2 211 28.4
AUR62034246 Chenopodium quinoa HOM05D019958 ORTHO05D000022 3.5e-08 62.8 189 29.1
vmacro19083 Vaccinium macrocarpon HOM05D000458 ORTHO05D000951 4.6e-08 62.4 185 25.9
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 7.8e-08 61.6 168 25.0
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 7.8e-08 61.6 190 26.3
vmacro05982 Vaccinium macrocarpon HOM05D002315 ORTHO05D002416 7.8e-08 61.6 102 29.4
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.0e-07 61.2 67 47.8
FvH4_5g31281 Fragaria vesca HOM05D008133 ORTHO05D009449 1.0e-07 61.2 129 34.9
Rhsim12G0201300 Rhododendron simsii HOM05D002908 ORTHO05D009379 1.7e-07 60.5 82 40.2
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 2.3e-07 60.1 214 26.6
RcHm_v2.0_Chr5g0012401 Rosa chinensis HOM05D000003 ORTHO05D010713 3.0e-07 59.7 191 29.3
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-07 59.3 186 28.5
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.8 211 23.7
CSS0006002 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-06 57.4 80 40.0
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-06 57.4 79 36.7
RcHm_v2.0_Chr1g0367181 Rosa chinensis HOM05D017965 ORTHO05D009449 1.5e-06 57.4 127 33.1
CANSAT80G2762 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-06 57.0 189 25.9
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.5e-06 56.6 179 24.6
Lj1g0019137 Lotus japonicus HOM05D000003 ORTHO05D007254 2.5e-06 56.6 211 27.0
Rhsim01G0039500 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.5e-06 56.6 108 32.4
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 2.5e-06 56.6 147 28.6
CiPaw.15G035300 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.3e-06 55.8 194 28.4
SGA_v2.0_scaffold130G34315 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-06 55.8 186 24.2
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 5.6e-06 55.5 150 28.7
Atru.chr13.1170 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-06 55.1 140 34.3
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-06 55.1 187 27.3
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 7.3e-06 55.1 138 27.5
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 7.3e-06 55.1 65 47.7
vmacro13033 Vaccinium macrocarpon HOM05D000076 ORTHO05D007254 7.3e-06 55.1 90 31.1
FvH4_1g29601 Fragaria vesca HOM05D000003 ORTHO05D000004 9.6e-06 54.7 159 25.8
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 9.6e-06 54.7 95 30.5
PSO170G0614 Papaver somniferum HOM05D003407 ORTHO05D001026 9.6e-06 54.7 144 27.8
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-06 54.7 188 26.1


User provided reference genes

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