Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037105 Camellia sinensis var. sinensis HOM05D008325 ORTHO05D010336 1.1e-51 206.8 149 100.0
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.6e-13 80.1 118 50.8
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 2.1e-13 79.7 122 44.3
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 2.1e-13 79.7 118 55.9
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 2.1e-13 79.7 118 55.9
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 1.0e-12 77.4 117 42.7
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 1.8e-12 76.6 146 46.6
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 5.1e-12 75.1 118 41.5
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 6.7e-12 74.7 146 36.3
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 6.7e-12 74.7 118 41.5
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 1.9e-11 73.2 122 36.1
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 1.3e-10 70.5 118 34.7
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 8.1e-10 67.8 118 37.3
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 2.4e-09 66.2 89 44.9
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 9.0e-09 64.3 89 40.4
Actinidia21366 Actinidia chinensis HOM05D008325 ORTHO05D010336 5.8e-08 61.6 114 36.8
DCAR_002920 Daucus carota HOM05D008325 ORTHO05D010336 7.6e-08 61.2 118 37.3
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 2.2e-07 59.7 118 35.6
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.2e-07 59.7 87 41.4
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 4.9e-07 58.5 90 45.6
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 8.4e-07 57.8 123 38.2
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 1.9e-06 56.6 95 42.1
Lj5g0017973 Lotus japonicus HOM05D008325 ORTHO05D010336 1.9e-06 56.6 87 40.2
Rhsim13G0001700 Rhododendron simsii HOM05D008325 ORTHO05D010336 1.9e-06 56.6 121 48.8
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 5.5e-06 55.1 120 36.7
Cpa.g.sc1096.2 Carica papaya HOM05D008325 ORTHO05D010336 9.3e-06 54.3 67 40.3
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 9.3e-06 54.3 80 37.5
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 9.3e-06 54.3 79 38.0


User provided reference genes

Program Settings