Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-107 393.3 198 100.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 4.8e-66 255.0 221 66.5
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.3e-49 198.4 188 58.5
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.1e-41 174.1 219 48.4
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.1e-33 147.5 212 44.3
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.0e-32 143.3 218 45.0
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 6.5e-31 138.3 225 40.4
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 9.7e-27 124.4 205 41.5
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.1e-25 120.9 233 40.3
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.6e-24 117.1 218 39.9
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 3.8e-23 112.5 199 36.2
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 6.5e-23 111.7 206 35.9
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 3.2e-22 109.4 210 37.1
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.6e-21 107.1 233 37.8
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 1.6e-21 107.1 195 40.0
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 4.7e-21 105.5 233 38.2
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 1.4e-20 104.0 232 36.2
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 6.8e-20 101.7 215 39.5
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.6e-19 99.8 216 38.4
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 2.6e-19 99.8 209 38.3
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 3.4e-19 99.4 209 38.3
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 2.8e-18 96.3 222 38.7
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 1.1e-17 94.4 221 38.9
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.4e-17 94.0 202 32.2
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.4e-17 93.2 205 37.6
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 7.7e-16 88.2 210 38.6
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 1.3e-15 87.4 217 35.9
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 1.3e-15 87.4 203 31.0
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 1.7e-15 87.0 208 29.8
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 2.9e-15 86.3 116 43.1
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.9e-14 83.6 207 30.9
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 4.2e-14 82.4 184 31.0
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 2.1e-13 80.1 203 29.6
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.1e-13 80.1 221 35.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 3.6e-13 79.3 210 32.9
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 4.7e-13 79.0 208 27.9
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 6.1e-13 78.6 75 61.3
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 1.0e-12 77.8 199 29.6
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.0e-12 77.8 221 33.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 1.4e-12 77.4 216 35.2
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.8e-12 77.0 218 27.1
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 1.8e-12 77.0 115 42.6
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 3.0e-12 76.3 210 29.0
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 4.0e-12 75.9 117 42.7
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 6.8e-12 75.1 216 27.8
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 8.8e-12 74.7 210 31.0
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.2e-11 74.3 204 27.9
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 3.4e-11 72.8 100 43.0
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 4.4e-11 72.4 119 46.2
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 2.8e-10 69.7 119 39.5
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 4.9e-10 68.9 48 68.8
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 2.4e-09 66.6 226 27.0
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 2.4e-09 66.6 245 30.2
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 3.1e-09 66.2 192 28.6
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 4.1e-09 65.9 67 53.7
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 4.1e-09 65.9 198 26.8
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 4.1e-09 65.9 115 39.1
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 5.4e-09 65.5 254 29.9
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.0e-09 65.1 255 29.8
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 9.2e-09 64.7 113 37.2
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 9.2e-09 64.7 224 24.6
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 2.0e-08 63.5 69 52.2
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 4.5e-08 62.4 49 61.2
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 1.0e-07 61.2 212 25.5
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 1.3e-07 60.8 114 34.2
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.9e-07 59.7 247 29.1
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 2.9e-07 59.7 242 26.0
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 6.6e-07 58.5 185 29.7
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 2.5e-06 56.6 184 28.8
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 3.3e-06 56.2 64 46.9
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 4.3e-06 55.8 134 32.1
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 9.5e-06 54.7 173 26.6


User provided reference genes

Program Settings