Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037052 Camellia sinensis var. sinensis HOM05D002801 ORTHO05D003002 1.8e-75 285.8 140 100.0
vmacro07286 Vaccinium macrocarpon HOM05D002801 ORTHO05D003002 3.0e-54 215.3 123 87.8
Rhsim03G0092600 Rhododendron simsii HOM05D002801 ORTHO05D003002 5.1e-54 214.5 123 87.0
Actinidia08779 Actinidia chinensis HOM05D002801 ORTHO05D003002 2.0e-50 202.6 119 85.7
Hma1.2p1_0205F.1_g087110 Hydrangea macrophylla HOM05D002801 ORTHO05D003002 5.1e-46 188.0 125 76.8
Dinv35783 Davidia involucrata HOM05D002801 ORTHO05D003002 8.6e-46 187.2 126 78.6
Dinv37307 Davidia involucrata HOM05D002801 ORTHO05D003002 3.3e-45 185.3 130 77.7
Cc04_g12180 Coffea canephora HOM05D002801 ORTHO05D003002 1.1e-43 180.3 122 74.6
GSVIVG01025725001 Vitis vinifera HOM05D002801 ORTHO05D003002 1.1e-43 180.3 125 76.0
Lj2A116G73 Lonicera japonica HOM05D002801 ORTHO05D003002 3.1e-43 178.7 122 75.4
Haze_20554 Corylus avellana HOM05D002801 ORTHO05D003002 7.6e-42 174.1 122 77.0
TAR633G0396 Trochodendron aralioides HOM05D002801 ORTHO05D003002 3.8e-41 171.8 132 73.5
Cfa017598 Carpinus fangiana HOM05D002801 ORTHO05D003002 4.9e-41 171.4 122 74.6
CiPaw.10G130300 Carya illinoinensis HOM05D002801 ORTHO05D003002 4.9e-41 171.4 125 75.2
Oeu040375.1 Olea europaea HOM05D002801 ORTHO05D003002 4.9e-41 171.4 123 74.0
Thecc.05G064900 Theobroma cacao HOM05D002801 ORTHO05D003002 8.4e-41 170.6 126 76.2
TAR636G1313 Trochodendron aralioides HOM05D002801 ORTHO05D003002 1.1e-40 170.2 125 72.8
Duzib093G0446 Durio zibethinus HOM05D002801 ORTHO05D003002 1.4e-40 169.9 126 75.4
Duzib128G1402 Durio zibethinus HOM05D002801 ORTHO05D003002 1.4e-40 169.9 125 75.2
QL07p043643 Quercus lobata HOM05D002801 ORTHO05D003002 1.9e-40 169.5 125 75.2
Eucgr.A01690 Eucalyptus grandis HOM05D002801 ORTHO05D003002 4.2e-40 168.3 126 72.2
Nitab4.5_0002632g0070 Nicotiana tabacum HOM05D002801 ORTHO05D003002 4.2e-40 168.3 155 61.9
Nitab4.5_0003861g0040 Nicotiana tabacum HOM05D002801 ORTHO05D003002 4.2e-40 168.3 155 60.6
arahy.Tifrunner.gnm1.ann1.IM29MK Arachis hypogaea HOM05D002801 ORTHO05D003002 5.4e-40 167.9 127 74.0
SalBow5G1472 Salvia bowleyana HOM05D002801 ORTHO05D003002 5.4e-40 167.9 121 74.4
SalBow5G4156 Salvia bowleyana HOM05D002801 ORTHO05D003002 5.4e-40 167.9 121 74.4
CAN.G900.43 Capsicum annuum HOM05D002801 ORTHO05D003002 7.1e-40 167.5 155 61.9
Gohir.A01G214500 Gossypium hirsutum HOM05D002801 ORTHO05D003002 7.1e-40 167.5 126 73.8
Manes.08G009700 Manihot esculenta HOM05D002801 ORTHO05D003002 2.1e-39 166.0 126 73.8
MSTRG.26694 Avicennia marina HOM05D002801 ORTHO05D003002 2.7e-39 165.6 124 74.2
CiPaw.10G130400 Carya illinoinensis HOM05D002801 ORTHO05D003002 2.7e-39 165.6 125 74.4
arahy.Tifrunner.gnm1.ann1.KV6AVL Arachis hypogaea HOM05D002801 ORTHO05D003002 3.5e-39 165.2 127 72.4
Gohir.D01G203000 Gossypium hirsutum HOM05D002801 ORTHO05D003002 3.5e-39 165.2 126 73.0
Glyma.02G048100 Glycine max HOM05D002801 ORTHO05D003002 7.8e-39 164.1 126 70.6
Glyma.16G128300 Glycine max HOM05D002801 ORTHO05D003002 7.8e-39 164.1 126 70.6
Nn2g11575 Nelumbo nucifera HOM05D002801 ORTHO05D003002 7.8e-39 164.1 126 73.0
Psat4g113080 Pisum sativum HOM05D002801 ORTHO05D003002 7.8e-39 164.1 126 70.6
TWI53G0691 Tripterygium wilfordii HOM05D002801 ORTHO05D003002 7.8e-39 164.1 126 72.2
Gohir.A04G072200 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.7e-38 162.9 126 73.0
Gohir.D04G110700 Gossypium hirsutum HOM05D002801 ORTHO05D003002 1.7e-38 162.9 126 73.0
Gorai.009G414900 Gossypium raimondii HOM05D002801 ORTHO05D003002 1.7e-38 162.9 126 73.0
TWI74G0434 Tripterygium wilfordii HOM05D002801 ORTHO05D003002 2.3e-38 162.5 126 72.2
MELO3C009350.2 Cucumis melo HOM05D002801 ORTHO05D003002 3.0e-38 162.2 125 71.2
Sopen09g002910 Solanum pennellii HOM05D002801 ORTHO05D003002 3.9e-38 161.8 155 61.9
Ciclev10011099m.g Citrus clementina HOM05D002801 ORTHO05D003002 5.1e-38 161.4 125 69.6
Manes.09G067140 Manihot esculenta HOM05D002801 ORTHO05D003002 5.1e-38 161.4 126 71.4
VMungo0251G2590 Vigna mungo HOM05D002801 ORTHO05D003002 5.1e-38 161.4 126 69.8
Atru.chr8.1823 Acer truncatum HOM05D002801 ORTHO05D003002 6.6e-38 161.0 126 72.2
ClCG10G020190 Citrullus lanatus HOM05D002801 ORTHO05D003002 6.6e-38 161.0 125 70.4
Phvul.003G261500 Phaseolus vulgaris HOM05D002801 ORTHO05D003002 1.1e-37 160.2 126 69.0
Ca_22518_v3 Cicer arietinum L. HOM05D002801 ORTHO05D003002 1.5e-37 159.8 128 70.3
PGR004G0677 Punica granatum HOM05D002801 ORTHO05D003002 3.3e-37 158.7 125 69.6
CsaV3_3G035910 Cucumis sativus L. HOM05D002801 ORTHO05D003002 5.6e-37 157.9 125 69.6
TPR.G24800 Trifolium pratense HOM05D002801 ORTHO05D003002 1.3e-36 156.8 126 69.0
CANSAT80G2908 Cannabis sativa HOM05D002801 ORTHO05D003002 1.6e-36 156.4 124 71.8
Medtr8g069965 Medicago truncatula HOM05D002801 ORTHO05D003002 1.6e-36 156.4 126 68.3
Sabra06G0099000 Salix brachista HOM05D002801 ORTHO05D003002 1.6e-36 156.4 143 62.9
Solyc09g008100.4 Solanum lycopersicum HOM05D002801 ORTHO05D003002 2.1e-36 156.0 155 60.6
Lalb_Chr09g0333141 Lupinus albus HOM05D002801 ORTHO05D003002 2.8e-36 155.6 130 67.7
Prupe.6G232900 Prunus persica HOM05D002801 ORTHO05D003002 3.6e-36 155.2 126 68.3
Lalb_Chr16g0391251 Lupinus albus HOM05D002801 ORTHO05D003002 4.8e-36 154.8 126 67.5
Potri.016G091700 Populus trichocarpa HOM05D002801 ORTHO05D003002 6.2e-36 154.5 124 72.6
RcHm_v2.0_Chr3g0470121 Rosa chinensis HOM05D002801 ORTHO05D003002 6.2e-36 154.5 113 73.5
Peaxi162Scf00701g00031 Petunia axillaris HOM05D002801 ORTHO05D003002 8.1e-36 154.1 179 52.0
Potri.006G125400 Populus trichocarpa HOM05D002801 ORTHO05D003002 8.1e-36 154.1 124 71.8
Sc02g0001680 Simmondsia chinensis HOM05D002801 ORTHO05D003002 8.1e-36 154.1 126 66.7
Sed0003779 Sechium edule HOM05D002801 ORTHO05D003002 1.4e-35 153.3 125 68.0
Sed0017434 Sechium edule HOM05D002801 ORTHO05D003002 1.4e-35 153.3 125 67.2
SGA_v2.0_scaffold35G14132 Striga asiatica HOM05D002801 ORTHO05D003002 1.8e-35 152.9 122 71.3
THA.LOC104806477 Tarenaya hassleriana HOM05D002801 ORTHO05D003002 1.8e-35 152.9 125 68.8
Cpa.g.sc56.26 Carica papaya HOM05D002801 ORTHO05D003002 2.4e-35 152.5 125 68.0
Sabra16G0097400 Salix brachista HOM05D002801 ORTHO05D009785 4.0e-35 151.8 123 70.7
HanXRQChr02g0053371 Helianthus annuus HOM05D002801 ORTHO05D003002 1.2e-34 150.2 125 71.2
Lsat_1_v5_gn_6_11100 Lactuca sativa HOM05D002801 ORTHO05D003002 1.2e-34 150.2 131 65.6
SHI12444 Sapria himalayana HOM05D002801 ORTHO05D003002 3.4e-34 148.7 120 66.7
Migut.L01697 Erythranthe guttata HOM05D002801 ORTHO05D003002 4.5e-34 148.3 166 55.4
FAN09G1888 Fragaria x ananassa HOM05D002801 ORTHO05D003002 4.5e-34 148.3 118 69.5
Lj4g0021696 Lotus japonicus HOM05D002801 ORTHO05D003002 4.5e-34 148.3 126 67.5
FvH4_6g16260 Fragaria vesca HOM05D002801 ORTHO05D003002 5.8e-34 147.9 118 69.5
FAN14G2570 Fragaria x ananassa HOM05D002801 ORTHO05D003002 5.8e-34 147.9 118 69.5
FAN05G5473 Fragaria x ananassa HOM05D002801 ORTHO05D003002 7.6e-34 147.5 113 72.6
MBI19_g35569_MAGBIO Magnolia biondii HOM05D002801 ORTHO05D003002 7.6e-34 147.5 147 57.8
FAN02G3555 Fragaria x ananassa HOM05D002801 ORTHO05D003002 9.9e-34 147.1 118 69.5
ECA238G4143 Erigeron canadensis HOM05D002801 ORTHO05D003002 1.3e-33 146.7 125 68.8
HanXRQChr01g0027631 Helianthus annuus HOM05D002801 ORTHO05D003002 1.3e-33 146.7 123 66.7
Aa31LG5G22170 Aethionema arabicum HOM05D002801 ORTHO05D003002 1.7e-33 146.4 125 66.4
DCAR_017687 Daucus carota HOM05D002801 ORTHO05D003002 3.8e-33 145.2 149 59.7
Aqoxy1G00134 Aquilegia oxysepala HOM05D002801 ORTHO05D003002 8.4e-33 144.1 126 68.3
ECA248G2038 Erigeron canadensis HOM05D002801 ORTHO05D003002 1.1e-32 143.7 125 64.8
MD12G1113900 Malus domestica HOM05D002801 ORTHO05D003002 1.1e-32 143.7 125 64.8
CDE06G1853 Ceratophyllum demersum HOM05D002801 ORTHO05D003002 1.9e-32 142.9 111 67.6
EL10Ac7g16619 Beta vulgaris HOM05D002801 ORTHO05D003002 3.2e-32 142.1 86 84.9
Thhalv10016298m.g Eutrema salsugineum HOM05D002801 ORTHO05D003002 5.4e-32 141.4 125 64.8
Sp4g19240 Schrenkiella parvula HOM05D002801 ORTHO05D003002 5.4e-32 141.4 125 64.8
CDE02G0847 Ceratophyllum demersum HOM05D002801 ORTHO05D003002 2.7e-31 139.0 83 83.1
Carub.0004s1880 Capsella rubella HOM05D002801 ORTHO05D003002 3.5e-31 138.7 79 89.9
MBI11_g28438_MAGBIO Magnolia biondii HOM05D002801 ORTHO05D003002 3.5e-31 138.7 150 56.0
BcaB02g09317 Brassica carinata HOM05D002801 ORTHO05D003002 7.9e-31 137.5 125 63.2
CARHR131420 Cardamine hirsuta HOM05D002801 ORTHO05D003002 7.9e-31 137.5 125 64.0
AT2G36960 Arabidopsis thaliana HOM05D002801 ORTHO05D003002 1.3e-30 136.7 80 88.8
BcaB01g03805 Brassica carinata HOM05D002801 ORTHO05D003002 1.3e-30 136.7 84 84.5
AL4G33200 Arabidopsis lyrata HOM05D002801 ORTHO05D003002 1.8e-30 136.3 80 88.8
BcaC02g11818 Brassica carinata HOM05D002801 ORTHO05D003002 1.8e-30 136.3 125 63.2
BolC4t22748H Brassica oleracea HOM05D002801 ORTHO05D003002 1.8e-30 136.3 125 63.2
HPP92_012371 Vanilla planifolia HOM05D002801 ORTHO05D003002 3.9e-30 135.2 78 85.9
A05p08890 Brassica napus HOM05D002801 ORTHO05D003002 8.7e-30 134.0 80 87.5
C04p11020 Brassica napus HOM05D002801 ORTHO05D003002 8.7e-30 134.0 80 87.5
BraA05t19854Z Brassica rapa HOM05D002801 ORTHO05D003002 8.7e-30 134.0 80 87.5
PSO339G6183 Papaver somniferum HOM05D002801 ORTHO05D003002 4.3e-29 131.7 130 57.7
PSO801G0542 Papaver somniferum HOM05D002801 ORTHO05D003002 7.4e-29 131.0 130 56.9
Zm00001eb399030 Zea mays HOM05D002801 ORTHO05D003002 1.6e-28 129.8 85 80.0
Zm00001eb058920 Zea mays HOM05D002801 ORTHO05D003002 3.6e-28 128.6 97 71.1
Os03g0773100 Oryza sativa ssp. japonica HOM05D002801 ORTHO05D003002 8.1e-28 127.5 82 80.5
CBR_g26407 Chara braunii HOM05D002801 ORTHO05D003002 4.5e-26 121.7 89 69.7
Os03g0241100 Oryza sativa ssp. japonica HOM05D002801 ORTHO05D003002 4.9e-25 118.2 74 82.4
SMO116G0270 Selaginella moellendorffii HOM05D002801 ORTHO05D003002 6.0e-23 111.3 105 57.1
AUR62026908 Chenopodium quinoa HOM05D002801 ORTHO05D003002 3.0e-22 109.0 53 98.1
Nn2g13773 Nelumbo nucifera HOM05D002801 ORTHO05D003002 4.3e-21 105.1 52 96.2
Mapoly0009s0010 Marchantia polymorpha HOM05D002801 ORTHO05D003002 1.3e-20 103.6 97 58.8
A04p28250 Brassica napus HOM05D002801 ORTHO05D003002 3.1e-19 99.0 65 81.5
ATR0115G018 Amborella trichopoda HOM05D002801 ORTHO05D003002 5.3e-19 98.2 52 90.4
HanXRQChr17g0568771 Helianthus annuus HOM05D002801 ORTHO05D003002 2.2e-17 92.8 53 86.8
CSS0035026 Camellia sinensis var. sinensis HOM05D002801 ORTHO05D003002 3.8e-17 92.0 68 72.1
BraA04t18309Z Brassica rapa HOM05D002801 ORTHO05D003002 1.0e-14 84.0 81 61.7
C04p65610 Brassica napus HOM05D002801 ORTHO05D003002 5.0e-09 65.1 46 76.1
BolC4t28051H Brassica oleracea HOM05D002801 ORTHO05D003002 1.8e-06 56.6 30 90.0
SGA_v2.0_scaffold112G31671 Striga asiatica HOM05D002801 ORTHO05D003002 2.3e-06 56.2 42 69.0
MCO07G427 Micromonas commoda HOM05D002801 ORTHO05D003002 3.9e-06 55.5 83 37.3
AUR62044224 Chenopodium quinoa HOM05D002801 ORTHO05D003002 5.1e-06 55.1 74 47.3


User provided reference genes

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