Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037045 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 3.5e-52 209.5 303 100.0
CSS0022359 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 9.9e-47 191.4 303 97.7
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 6.5e-30 135.6 70 92.9
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 6.5e-30 135.6 70 92.9
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.4e-29 134.4 67 95.5
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.1e-21 108.2 58 87.9
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 1.8e-19 100.9 73 65.8
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 2.4e-16 90.5 53 69.8
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 5.3e-16 89.4 62 61.3
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 1.0e-14 85.1 62 64.5
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 2.2e-14 84.0 62 59.7
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 2.9e-14 83.6 48 79.2
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 4.2e-13 79.7 62 58.1
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 5.5e-13 79.3 54 68.5
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 7.2e-13 79.0 62 58.1
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 1.2e-12 78.2 45 73.3
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 1.6e-12 77.8 45 73.3
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 1.6e-12 77.8 62 53.2
RcHm_v2.0_Chr4g0419111 Rosa chinensis HOM05D007340 ORTHO05D008979 2.1e-12 77.4 62 54.8
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 4.7e-12 76.3 44 72.7
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 7.9e-12 75.5 44 75.0
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 1.0e-11 75.1 45 71.1
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 1.4e-11 74.7 44 72.7
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 1.4e-11 74.7 44 75.0
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 1.8e-11 74.3 49 63.3
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 1.8e-11 74.3 64 50.0
Prupe.1G570100 Prunus persica HOM05D007340 ORTHO05D008979 2.3e-11 73.9 46 69.6
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 5.1e-11 72.8 52 59.6
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 6.7e-11 72.4 67 49.3
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 6.7e-11 72.4 59 54.2
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.1e-10 71.6 61 55.7
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.1e-10 71.6 61 55.7
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 1.5e-10 71.2 46 67.4
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 5.7e-10 69.3 44 70.5
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 7.4e-10 68.9 60 50.0
Nn1g01889 Nelumbo nucifera HOM05D007340 ORTHO05D008979 9.7e-10 68.6 63 47.6
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 2.2e-09 67.4 40 72.5
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 6.3e-09 65.9 61 47.5
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 1.1e-08 65.1 59 50.8
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 2.4e-08 63.9 56 46.4
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 3.1e-08 63.5 49 61.2
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.5e-07 61.2 64 43.8
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 1.5e-07 61.2 52 50.0
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 3.4e-07 60.1 50 56.0
BcaB01g05282 Brassica carinata HOM05D007340 ORTHO05D021722 1.3e-06 58.2 31 74.2
ATR0582G031 Amborella trichopoda HOM05D007340 ORTHO05D008979 1.7e-06 57.8 60 43.3
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 2.9e-06 57.0 59 45.8
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 3.8e-06 56.6 30 83.3
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 5.0e-06 56.2 51 45.1


User provided reference genes

Program Settings