Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037037 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 8.9e-151 537.0 281 100.0
CSS0041504 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 2.2e-149 532.3 281 99.3
CSS0034323 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 4.3e-137 491.5 273 94.9
CSS0025398 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 4.9e-64 248.8 228 66.2
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 5.1e-29 132.5 225 40.4
Actinidia24930 Actinidia chinensis HOM05D001695 ORTHO05D002735 3.3e-28 129.8 228 39.0
Haze_24517 Corylus avellana HOM05D001695 ORTHO05D002735 3.3e-28 129.8 188 42.0
Nitab4.5_0000187g0060 Nicotiana tabacum HOM05D001695 ORTHO05D002735 3.4e-25 119.8 209 37.8
Medtr7g095920 Medicago truncatula HOM05D001695 ORTHO05D002735 7.6e-25 118.6 205 37.6
Prupe.8G233300 Prunus persica HOM05D001695 ORTHO05D002735 2.2e-24 117.1 230 35.2
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 2.9e-24 116.7 200 38.5
MD03G1256200 Malus domestica HOM05D001695 ORTHO05D002735 2.9e-24 116.7 228 35.1
CiPaw.03G256000 Carya illinoinensis HOM05D001695 ORTHO05D002735 3.8e-24 116.3 229 34.9
VMungo1383G2569 Vigna mungo HOM05D001695 ORTHO05D002735 1.4e-23 114.4 174 41.4
Medtr1g471050 Medicago truncatula HOM05D001695 ORTHO05D002735 4.2e-23 112.8 193 37.3
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 4.2e-23 112.8 205 36.1
TAR365G0574 Trochodendron aralioides HOM05D001695 ORTHO05D002735 9.3e-23 111.7 228 35.1
MD11G1277000 Malus domestica HOM05D001695 ORTHO05D002735 1.2e-22 111.3 209 35.9
Eucgr.K03319 Eucalyptus grandis HOM05D001695 ORTHO05D002735 2.1e-22 110.5 241 34.9
FAN15G1129 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.7e-22 110.2 228 34.2
FAN20G2833 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.7e-22 110.2 228 34.2
Manes.05G082900 Manihot esculenta HOM05D001695 ORTHO05D002735 2.7e-22 110.2 193 37.3
Thecc.01G269300 Theobroma cacao HOM05D001695 ORTHO05D002735 2.7e-22 110.2 230 35.2
FAN27G1986 Fragaria x ananassa HOM05D001695 ORTHO05D002735 3.5e-22 109.8 228 34.2
TPR.G19108 Trifolium pratense HOM05D001695 ORTHO05D002735 3.5e-22 109.8 208 36.1
Peaxi162Scf00165g00212 Petunia axillaris HOM05D001695 ORTHO05D002735 6.0e-22 109.0 221 32.6
arahy.Tifrunner.gnm1.ann1.Z2VWUQ Arachis hypogaea HOM05D001695 ORTHO05D002735 1.0e-21 108.2 163 40.5
FvH4_2g22790 Fragaria vesca HOM05D001695 ORTHO05D002735 1.0e-21 108.2 228 33.3
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 1.7e-21 107.5 228 34.6
TWI12G0096 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 1.7e-21 107.5 228 32.9
FAN24G2593 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.3e-21 107.1 228 33.3
RcHm_v2.0_Chr6g0289711 Rosa chinensis HOM05D001695 ORTHO05D002735 2.3e-21 107.1 228 32.9
Cpa.g.sc1247.1 Carica papaya HOM05D001695 ORTHO05D002735 3.0e-21 106.7 229 34.1
CiPaw.04G181000 Carya illinoinensis HOM05D001695 ORTHO05D002735 3.9e-21 106.3 159 39.6
Oeu025777.1 Olea europaea HOM05D001695 ORTHO05D002735 3.9e-21 106.3 199 35.7
GSVIVG01003138001 Vitis vinifera HOM05D001695 ORTHO05D002735 3.9e-21 106.3 228 35.5
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 6.6e-21 105.5 229 34.1
Dinv34556 Davidia involucrata HOM05D001695 ORTHO05D002735 6.6e-21 105.5 200 37.0
MBI11_g26137_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 6.6e-21 105.5 143 41.3
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 1.1e-20 104.8 228 34.2
QL12p042507 Quercus lobata HOM05D001695 ORTHO05D002735 1.1e-20 104.8 159 40.3
Migut.D00346 Erythranthe guttata HOM05D001695 ORTHO05D002735 2.5e-20 103.6 158 38.0
Sed0027528 Sechium edule HOM05D001695 ORTHO05D002735 2.5e-20 103.6 232 33.2
EL10Ac5g10482 Beta vulgaris HOM05D001695 ORTHO05D002735 3.3e-20 103.2 98 50.0
arahy.Tifrunner.gnm1.ann1.S9HU1U Arachis hypogaea HOM05D001695 ORTHO05D002735 4.3e-20 102.8 153 40.5
MSTRG.21518 Avicennia marina HOM05D001695 ORTHO05D002735 7.3e-20 102.1 159 37.7
PGR044G2111 Punica granatum HOM05D001695 ORTHO05D002735 9.6e-20 101.7 209 33.0
PSO121G0001 Papaver somniferum HOM05D001695 ORTHO05D002735 1.3e-19 101.3 236 32.6
Phvul.001G155600 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 1.3e-19 101.3 157 40.8
Sed0003781 Sechium edule HOM05D001695 ORTHO05D002735 1.3e-19 101.3 157 39.5
CANSAT25G1261 Cannabis sativa HOM05D001695 ORTHO05D002735 1.6e-19 100.9 228 33.8
Atru.chr3.758 Acer truncatum HOM05D001695 ORTHO05D002735 2.1e-19 100.5 160 40.6
Lj1g0012318 Lotus japonicus HOM05D001695 ORTHO05D002735 2.1e-19 100.5 207 33.8
Atru.chr5.1541 Acer truncatum HOM05D001695 ORTHO05D002735 2.8e-19 100.1 155 42.6
CsaV3_2G013780 Cucumis sativus L. HOM05D001695 ORTHO05D002735 3.6e-19 99.8 159 39.0
COL.COLO4_06098 Corchorus olitorius HOM05D001695 ORTHO05D002735 6.2e-19 99.0 228 32.0
Gohir.A07G208000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 6.2e-19 99.0 232 33.6
PSO461G0037 Papaver somniferum HOM05D001695 ORTHO05D002735 6.2e-19 99.0 235 32.3
ClCG07G000550 Citrullus lanatus HOM05D001695 ORTHO05D002735 8.1e-19 98.6 203 34.0
MELO3C014318.2 Cucumis melo HOM05D001695 ORTHO05D002735 8.1e-19 98.6 159 38.4
Cc01_g18940 Coffea canephora HOM05D001695 ORTHO05D002735 1.1e-18 98.2 162 37.7
PSO210G5739 Papaver somniferum HOM05D001695 ORTHO05D002735 1.1e-18 98.2 235 31.9
PSO210G5800 Papaver somniferum HOM05D001695 ORTHO05D002735 1.1e-18 98.2 235 31.9
Phvul.007G175900 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 1.1e-18 98.2 179 35.2
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 1.4e-18 97.8 228 32.5
SalBow4G0856 Salvia bowleyana HOM05D001695 ORTHO05D002735 1.4e-18 97.8 159 37.7
Gorai.001G242000 Gossypium raimondii HOM05D001695 ORTHO05D002735 1.8e-18 97.4 232 33.6
Lalb_Chr01g0019951 Lupinus albus HOM05D001695 ORTHO05D002735 2.4e-18 97.1 193 32.6
Solyc09g065750.3 Solanum lycopersicum HOM05D001695 ORTHO05D002735 3.1e-18 96.7 158 37.3
DCAR_012509 Daucus carota HOM05D001695 ORTHO05D002735 4.0e-18 96.3 228 31.1
Gohir.D07G214000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 5.3e-18 95.9 232 33.2
Nn3g19467 Nelumbo nucifera HOM05D001695 ORTHO05D002735 6.9e-18 95.5 170 35.9
Potri.005G216400 Populus trichocarpa HOM05D001695 ORTHO05D002735 9.0e-18 95.1 229 31.9
Lsat_1_v5_gn_9_7981 Lactuca sativa HOM05D001695 ORTHO05D002735 8.4e-16 88.6 176 34.7
VMungo0720G1092 Vigna mungo HOM05D001695 ORTHO05D002735 8.4e-16 88.6 192 32.8
DCAR_018439 Daucus carota HOM05D001695 ORTHO05D002735 1.1e-15 88.2 163 34.4
Potri.002G046500 Populus trichocarpa HOM05D001695 ORTHO05D002735 4.2e-15 86.3 228 29.4
Sc05g0001110 Simmondsia chinensis HOM05D001695 ORTHO05D002735 5.4e-15 85.9 128 35.2
Lj2A1162G32 Lonicera japonica HOM05D001695 ORTHO05D002735 9.3e-15 85.1 100 49.0
TPR.G39069 Trifolium pratense HOM05D001695 ORTHO05D002735 9.3e-15 85.1 54 72.2
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 4.6e-14 82.8 201 30.8
HanXRQChr13g0419591 Helianthus annuus HOM05D001695 ORTHO05D002735 4.6e-14 82.8 159 34.0
Lsat_1_v5_gn_8_94460 Lactuca sativa HOM05D001695 ORTHO05D002735 4.6e-14 82.8 139 35.3
ECA236G1508 Erigeron canadensis HOM05D001695 ORTHO05D002735 6.0e-14 82.4 206 31.1
Rhsim01G0271300 Rhododendron simsii HOM05D001695 ORTHO05D002735 7.9e-14 82.0 254 28.7
HanXRQChr15g0466931 Helianthus annuus HOM05D001695 ORTHO05D002735 2.3e-13 80.5 222 30.6
arahy.Tifrunner.gnm1.ann1.Q3JBH6 Arachis hypogaea HOM05D001695 ORTHO05D002735 6.7e-13 79.0 53 66.0
unitig_0.g1130 Utricularia gibba HOM05D001695 ORTHO05D002735 4.3e-12 76.3 111 44.1
MSTRG.18276 Avicennia marina HOM05D001695 ORTHO05D002735 5.6e-12 75.9 52 65.4
Zm00001eb114700 Zea mays HOM05D001695 ORTHO05D002735 7.4e-12 75.5 159 30.8
Zm00001eb114610 Zea mays HOM05D001695 ORTHO05D002735 9.6e-12 75.1 159 30.8
PGSC0003DMG400019307 Solanum tuberosum HOM05D001695 ORTHO05D002735 1.6e-11 74.3 42 78.6
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 6.2e-11 72.4 95 44.2
SalBow4G3275 Salvia bowleyana HOM05D001695 ORTHO05D002735 3.1e-10 70.1 37 81.1
Glyma.19G160300 Glycine max HOM05D001695 ORTHO05D002735 4.0e-10 69.7 52 63.5
CAN.G1797.1 Capsicum annuum HOM05D001695 ORTHO05D002735 1.2e-09 68.2 34 85.3
arahy.Tifrunner.gnm1.ann1.PL7EZQ Arachis hypogaea HOM05D001695 ORTHO05D002735 2.6e-09 67.0 67 52.2
TPR.G39141 Trifolium pratense HOM05D001695 ORTHO05D002735 9.9e-09 65.1 34 79.4
Aa31LG1G9480 Aethionema arabicum HOM05D001695 ORTHO05D002735 1.3e-08 64.7 210 25.7
BcaC07g42270 Brassica carinata HOM05D001695 ORTHO05D002735 3.8e-08 63.2 157 28.0
PSO210G5923 Papaver somniferum HOM05D001695 ORTHO05D002735 3.8e-08 63.2 87 41.4
THA.LOC104801253 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 4.9e-08 62.8 160 30.0
ECA247G1754 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.1e-07 61.6 194 23.7
Sabra05G0165900 Salix brachista HOM05D001695 ORTHO05D002735 1.1e-07 61.6 34 76.5
Sabra05G0166000 Salix brachista HOM05D001695 ORTHO05D002735 1.4e-07 61.2 123 34.1
SGA_v2.0_scaffold1G00547 Striga asiatica HOM05D001695 ORTHO05D002735 1.9e-07 60.8 90 38.9
A09p68380 Brassica napus HOM05D001695 ORTHO05D002735 3.2e-07 60.1 157 27.4
BraA09t42174Z Brassica rapa HOM05D001695 ORTHO05D002735 3.2e-07 60.1 157 27.4
CDE07G0714 Ceratophyllum demersum HOM05D001695 ORTHO05D002735 4.2e-07 59.7 36 63.9
Thhalv10008499m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 4.2e-07 59.7 157 28.0
ATR0606G001 Amborella trichopoda HOM05D001695 ORTHO05D002735 5.5e-07 59.3 34 64.7
arahy.Tifrunner.gnm1.ann1.IA8L34 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.6e-06 57.8 34 70.6
C08p52950 Brassica napus HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
BolC8t52811H Brassica oleracea HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
PSO210G7498 Papaver somniferum HOM05D001695 ORTHO05D002735 2.7e-06 57.0 33 69.7
AT1G03055 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 3.5e-06 56.6 156 27.6
CARHR002400 Cardamine hirsuta HOM05D001695 ORTHO05D002735 6.0e-06 55.8 156 26.3
Sp1g02050 Schrenkiella parvula HOM05D001695 ORTHO05D002735 6.0e-06 55.8 33 66.7


User provided reference genes

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