Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037002 Camellia sinensis var. sinensis HOM05D000573 ORTHO05D000425 5.6e-104 380.9 192 100.0
vmacro05472 Vaccinium macrocarpon HOM05D000573 ORTHO05D000425 1.6e-21 107.1 136 54.4
Rhsim10G0083100 Rhododendron simsii HOM05D000573 ORTHO05D000425 2.3e-20 103.2 139 51.1
Dinv32663 Davidia involucrata HOM05D000573 ORTHO05D000425 2.1e-18 96.7 114 53.5
TAR375G0302 Trochodendron aralioides HOM05D000573 ORTHO05D000425 3.0e-17 92.8 132 48.5
Atru.chr5.815 Acer truncatum HOM05D000573 ORTHO05D000425 1.8e-14 83.6 90 54.4
BolC8t51272H Brassica oleracea HOM05D000573 ORTHO05D000425 1.8e-14 83.6 76 63.2
A09p54070 Brassica napus HOM05D000573 ORTHO05D000425 2.4e-14 83.2 76 63.2
BraA09t40820Z Brassica rapa HOM05D000573 ORTHO05D000425 3.1e-14 82.8 76 61.8
BcaC07g40696 Brassica carinata HOM05D000573 ORTHO05D000425 4.1e-14 82.4 76 63.2
BcaC07g42625 Brassica carinata HOM05D000573 ORTHO05D000425 4.1e-14 82.4 76 63.2
C08p36960 Brassica napus HOM05D000573 ORTHO05D000425 4.1e-14 82.4 76 63.2
THA.LOC104802110 Tarenaya hassleriana HOM05D000573 ORTHO05D000425 9.2e-14 81.3 92 51.1
MBI04_g09826_MAGBIO Magnolia biondii HOM05D000573 ORTHO05D000425 1.2e-13 80.9 128 44.5
Oeu048537.1 Olea europaea HOM05D000573 ORTHO05D000425 2.7e-13 79.7 63 66.7
Thecc.01G329200 Theobroma cacao HOM05D000573 ORTHO05D000425 2.7e-13 79.7 102 46.1
Manes.01G237200 Manihot esculenta HOM05D000573 ORTHO05D000425 3.5e-13 79.3 69 63.8
CANSAT56G0351 Cannabis sativa HOM05D000573 ORTHO05D000425 4.5e-13 79.0 85 49.4
MD05G1209400 Malus domestica HOM05D000573 ORTHO05D000425 4.5e-13 79.0 78 52.6
Prupe.4G148100 Prunus persica HOM05D000573 ORTHO05D000425 4.5e-13 79.0 77 51.9
VMungo1080G1329 Vigna mungo HOM05D000573 ORTHO05D000425 4.5e-13 79.0 64 60.9
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 5.9e-13 78.6 64 62.5
Migut.A00398 Erythranthe guttata HOM05D000573 ORTHO05D000425 5.9e-13 78.6 60 68.3
EL10Ac5g11793 Beta vulgaris HOM05D000573 ORTHO05D000425 7.8e-13 78.2 64 62.5
AUR62036299 Chenopodium quinoa HOM05D000573 ORTHO05D000425 7.8e-13 78.2 64 62.5
DCAR_020094 Daucus carota HOM05D000573 ORTHO05D000425 7.8e-13 78.2 64 60.9
DCAR_020095 Daucus carota HOM05D000573 ORTHO05D000425 7.8e-13 78.2 64 60.9
Sabra02G0132000 Salix brachista HOM05D000573 ORTHO05D000425 7.8e-13 78.2 66 62.1
AT3G62000 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 1.0e-12 77.8 76 56.6
arahy.Tifrunner.gnm1.ann1.06014X Arachis hypogaea HOM05D000573 ORTHO05D000425 1.0e-12 77.8 85 49.4
SalBow4G0535 Salvia bowleyana HOM05D000573 ORTHO05D000425 1.3e-12 77.4 77 58.4
Gohir.A12G118500 Gossypium hirsutum HOM05D000573 ORTHO05D000425 1.7e-12 77.0 86 52.3
CARHR172350 Cardamine hirsuta HOM05D000573 ORTHO05D000425 2.3e-12 76.6 76 56.6
HanXRQChr03g0060601 Helianthus annuus HOM05D000573 ORTHO05D000425 2.3e-12 76.6 60 65.0
HanXRQChr07g0194631 Helianthus annuus HOM05D000573 ORTHO05D000425 2.3e-12 76.6 60 65.0
Potri.002G183600 Populus trichocarpa HOM05D000573 ORTHO05D000425 2.3e-12 76.6 66 62.1
Lalb_Chr25g0285321 Lupinus albus HOM05D000573 ORTHO05D000425 2.9e-12 76.3 60 60.0
SGA_v2.0_scaffold27G11637 Striga asiatica HOM05D000573 ORTHO05D000425 2.9e-12 76.3 57 66.7
Lj3g0011456 Lotus japonicus HOM05D000573 ORTHO05D000425 3.8e-12 75.9 59 62.7
Cfa019448 Carpinus fangiana HOM05D000573 ORTHO05D000425 5.0e-12 75.5 64 62.5
Duzib138G0303 Durio zibethinus HOM05D000573 ORTHO05D000425 5.0e-12 75.5 102 44.1
PSO782G0926 Papaver somniferum HOM05D000573 ORTHO05D000425 5.0e-12 75.5 66 59.1
arahy.Tifrunner.gnm1.ann1.AU4AKR Arachis hypogaea HOM05D000573 ORTHO05D000425 6.6e-12 75.1 85 49.4
Gohir.D12G122300 Gossypium hirsutum HOM05D000573 ORTHO05D000425 6.6e-12 75.1 129 43.4
Gorai.008G133100 Gossypium raimondii HOM05D000573 ORTHO05D000425 6.6e-12 75.1 129 42.6
Lj9A610G58 Lonicera japonica HOM05D000573 ORTHO05D000425 6.6e-12 75.1 61 67.2
Phvul.005G051900 Phaseolus vulgaris HOM05D000573 ORTHO05D000425 6.6e-12 75.1 74 51.4
CiPaw.12G045400 Carya illinoinensis HOM05D000573 ORTHO05D000425 8.6e-12 74.7 90 48.9
Nn1g00498 Nelumbo nucifera HOM05D000573 ORTHO05D000425 8.6e-12 74.7 62 59.7
RcHm_v2.0_Chr5g0027561 Rosa chinensis HOM05D000573 ORTHO05D000425 8.6e-12 74.7 50 66.0
Aa31LG10G15980 Aethionema arabicum HOM05D000573 ORTHO05D000425 1.1e-11 74.3 59 64.4
AL5G44620 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.1e-11 74.3 76 55.3
Lsat_1_v5_gn_2_108380 Lactuca sativa HOM05D000573 ORTHO05D000425 1.1e-11 74.3 83 55.4
GSVIVG01027486001 Vitis vinifera HOM05D000573 ORTHO05D000425 1.5e-11 73.9 105 43.8
ECA238G3901 Erigeron canadensis HOM05D000573 ORTHO05D000425 1.9e-11 73.6 61 62.3
Thhalv10006151m.g Eutrema salsugineum HOM05D000573 ORTHO05D000425 1.9e-11 73.6 59 64.4
FAN21G2458 Fragaria x ananassa HOM05D000573 ORTHO05D000425 1.9e-11 73.6 61 59.0
FAN25G0530 Fragaria x ananassa HOM05D000573 ORTHO05D000425 1.9e-11 73.6 47 70.2
Psat1g001520 Pisum sativum HOM05D000573 ORTHO05D000425 1.9e-11 73.6 59 64.4
unitig_699.g19813 Utricularia gibba HOM05D000573 ORTHO05D000425 1.9e-11 73.6 64 59.4
Cpa.g.sc57.61 Carica papaya HOM05D000573 ORTHO05D000425 2.5e-11 73.2 64 59.4
Glyma.08G175700 Glycine max HOM05D000573 ORTHO05D000425 2.5e-11 73.2 64 56.2
FvH4_3g16510 Fragaria vesca HOM05D000573 ORTHO05D000425 3.3e-11 72.8 68 51.5
AT3G61990 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 4.3e-11 72.4 110 45.5
Ca_03460_v3 Cicer arietinum L. HOM05D000573 ORTHO05D000425 4.3e-11 72.4 74 52.7
PGR042G2428 Punica granatum HOM05D000573 ORTHO05D000425 4.3e-11 72.4 59 62.7
Carub.0005s2875 Capsella rubella HOM05D000573 ORTHO05D000425 5.6e-11 72.0 76 52.6
PSO063G4502 Papaver somniferum HOM05D000573 ORTHO05D000425 5.6e-11 72.0 66 57.6
QL04p071295 Quercus lobata HOM05D000573 ORTHO05D000425 9.5e-11 71.2 64 56.2
TPR.G29763 Trifolium pratense HOM05D000573 ORTHO05D000425 9.5e-11 71.2 59 59.3
Medtr2g070410 Medicago truncatula HOM05D000573 ORTHO05D000425 1.2e-10 70.9 69 55.1
Eucgr.F04260 Eucalyptus grandis HOM05D000573 ORTHO05D000425 1.6e-10 70.5 64 57.8
FAN16G3481 Fragaria x ananassa HOM05D000573 ORTHO05D000425 1.6e-10 70.5 47 68.1
CAN.G353.19 Capsicum annuum HOM05D000573 ORTHO05D000425 2.1e-10 70.1 89 49.4
Sc01g0005230 Simmondsia chinensis HOM05D000573 ORTHO05D000425 2.1e-10 70.1 47 66.0
Solyc08g006830.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 2.8e-10 69.7 84 50.0
ATR0579G089 Amborella trichopoda HOM05D000573 ORTHO05D000425 4.7e-10 68.9 55 63.6
AL5G44610 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 4.7e-10 68.9 94 45.7
Ciclev10021579m.g Citrus clementina HOM05D000573 ORTHO05D000425 6.1e-10 68.6 73 52.1
Cc02_g30340 Coffea canephora HOM05D000573 ORTHO05D000425 8.0e-10 68.2 70 50.0
Sopen08g002780 Solanum pennellii HOM05D000573 ORTHO05D000425 1.4e-09 67.4 84 48.8
PGSC0003DMG401026272 Solanum tuberosum HOM05D000573 ORTHO05D000425 1.8e-09 67.0 84 48.8
Peaxi162Scf00045g02123 Petunia axillaris HOM05D000573 ORTHO05D000425 3.1e-09 66.2 84 48.8
FAN11G3936 Fragaria x ananassa HOM05D000573 ORTHO05D000425 4.0e-09 65.9 38 73.7
HPP92_005317 Vanilla planifolia HOM05D000573 ORTHO05D000425 4.0e-09 65.9 50 64.0
HPP92_005323 Vanilla planifolia HOM05D000573 ORTHO05D000425 4.0e-09 65.9 67 53.7
HPP92_005365 Vanilla planifolia HOM05D000573 ORTHO05D000425 4.0e-09 65.9 67 53.7
Nitab4.5_0012293g0010 Nicotiana tabacum HOM05D000573 ORTHO05D000425 5.2e-09 65.5 58 60.3
Ah.02g112180 Amaranthus hybridus HOM05D000573 ORTHO05D000425 1.2e-08 64.3 79 45.6
Nitab4.5_0000114g0130 Nicotiana tabacum HOM05D000573 ORTHO05D000425 1.2e-08 64.3 58 58.6
CDE12G0122 Ceratophyllum demersum HOM05D000573 ORTHO05D000425 9.8e-08 61.2 107 40.2
Sp5g01360 Schrenkiella parvula HOM05D000573 ORTHO05D000425 1.3e-07 60.8 50 62.0
Haze_08500 Corylus avellana HOM05D000573 ORTHO05D000425 1.7e-07 60.5 38 73.7
HanXRQChr09g0259151 Helianthus annuus HOM05D000573 ORTHO05D000425 1.7e-07 60.5 42 71.4
MELO3C016162.2 Cucumis melo HOM05D000573 ORTHO05D000425 3.2e-06 56.2 52 55.8
AagrBONN_evm.TU.Sc2ySwM_340.1452 Anthoceros agrestis HOM05D000573 ORTHO05D000425 4.1e-06 55.8 42 57.1
ClCG07G010560 Citrullus lanatus HOM05D000573 ORTHO05D000425 4.1e-06 55.8 52 55.8
CsaV3_4G007750 Cucumis sativus L. HOM05D000573 ORTHO05D000425 9.2e-06 54.7 52 55.8


User provided reference genes

Program Settings