Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.0e-36 155.2 77 100.0
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.0e-36 155.2 77 100.0
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.5e-31 139.0 76 89.5
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.5e-31 138.3 77 85.7
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 3.3e-31 137.9 77 87.0
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 3.3e-31 137.9 77 85.7
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 4.3e-31 137.5 72 91.7
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 4.3e-31 137.5 72 93.1
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 7.4e-31 136.7 73 87.7
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 7.4e-31 136.7 73 87.7
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.3e-30 136.0 73 87.7
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.3e-30 136.0 73 87.7
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.3e-30 136.0 73 87.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.6e-30 135.6 77 85.7
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.1e-30 135.2 76 86.8
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.8e-30 134.8 73 86.3
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 4.8e-30 134.0 77 84.4
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 4.8e-30 134.0 73 86.3
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 4.8e-30 134.0 73 89.0
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 6.2e-30 133.7 77 84.4
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.1e-29 132.9 73 86.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.4e-29 132.5 77 84.4
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 2.4e-29 131.7 73 83.6
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 3.1e-29 131.3 73 86.3
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 3.1e-29 131.3 77 80.5
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 3.1e-29 131.3 73 86.3
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 4.0e-29 131.0 73 83.6
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 5.3e-29 130.6 73 86.3
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.3e-29 130.6 73 83.6
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 1.2e-28 129.4 77 81.8
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 1.2e-28 129.4 73 83.6
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.5e-28 129.0 77 81.8
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 1.5e-28 129.0 75 82.7
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 1.5e-28 129.0 75 82.7
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 2.0e-28 128.6 73 84.9
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.0e-28 128.6 75 82.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 2.0e-28 128.6 73 84.9
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 2.0e-28 128.6 77 77.9
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 2.0e-28 128.6 75 82.7
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 2.6e-28 128.3 66 92.4
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 2.6e-28 128.3 77 80.5
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 3.4e-28 127.9 73 82.2
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 4.5e-28 127.5 75 81.3
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 4.5e-28 127.5 75 81.3
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 4.5e-28 127.5 75 81.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 4.5e-28 127.5 77 76.6
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 4.5e-28 127.5 77 80.5
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 5.8e-28 127.1 77 79.2
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 5.8e-28 127.1 77 79.2
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.8e-28 127.1 77 76.6
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 7.6e-28 126.7 73 82.2
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 7.6e-28 126.7 75 81.3
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.0e-27 126.3 75 81.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.3e-27 125.9 73 82.2
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.7e-27 125.6 75 78.7
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 1.7e-27 125.6 75 77.3
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.7e-27 125.6 73 79.5
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.2e-27 125.2 73 83.6
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 2.9e-27 124.8 77 77.9
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.8e-27 124.4 75 80.0
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 3.8e-27 124.4 77 75.3
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 6.5e-27 123.6 73 80.8
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 6.5e-27 123.6 73 78.1
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 8.4e-27 123.2 75 78.7
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 8.4e-27 123.2 73 78.1
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 80.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 1.1e-26 122.9 76 76.3
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 78.7
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.4e-26 122.5 75 78.7
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 77.3
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 76.6
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.9e-26 122.1 77 76.6
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 2.5e-26 121.7 73 80.8
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 3.2e-26 121.3 73 80.8
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 5.5e-26 120.6 77 72.7
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 5.5e-26 120.6 73 79.5
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 5.5e-26 120.6 75 80.0
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.2e-25 119.4 73 76.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.6e-25 119.0 76 73.7
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 2.7e-25 118.2 77 74.0
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 4.6e-25 117.5 73 75.3
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 4.6e-25 117.5 72 77.8
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 6.0e-25 117.1 73 78.1
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.0e-24 116.3 73 76.7
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.0e-24 116.3 77 74.0
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.3e-24 115.9 73 76.7
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.3e-24 115.9 73 76.7
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 1.8e-24 115.5 73 76.7
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 3.9e-24 114.4 73 75.3
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 5.1e-24 114.0 77 72.7
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 6.7e-24 113.6 67 77.6
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 8.7e-24 113.2 77 70.1
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 8.7e-24 113.2 73 75.3
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 4.3e-23 110.9 73 71.2
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 3.7e-22 107.8 70 75.7
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 3.7e-22 107.8 74 74.3
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 4.8e-22 107.5 74 75.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 4.8e-22 107.5 74 74.3
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 1.1e-21 106.3 103 55.3
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 1.1e-21 106.3 74 71.6
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 1.4e-21 105.9 74 71.6
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 3.1e-21 104.8 74 71.6
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 2.0e-20 102.1 76 61.8
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 2.6e-20 101.7 74 71.6
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 3.4e-20 101.3 72 66.7
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 8.5e-19 96.7 68 60.3
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 4.2e-18 94.4 115 47.8
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.6e-17 92.4 48 89.6
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.6e-17 92.4 66 71.2
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 5.1e-16 87.4 68 54.4
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 1.4e-13 79.3 43 83.7
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 4.1e-13 77.8 68 51.5
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 2.0e-12 75.5 44 79.5
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 2.6e-12 75.1 43 76.7
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 2.6e-12 75.1 46 73.9
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 1.7e-11 72.4 57 64.9
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 3.6e-09 64.7 43 74.4
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 6.1e-09 63.9 63 46.0
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 7.9e-09 63.5 35 82.9
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 2.6e-07 58.5 32 78.1
CsaV3_2G013260 Cucumis sativus L. HOM05D006636 ORTHO05D008266 1.7e-06 55.8 30 83.3
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 2.2e-06 55.5 34 73.5
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 6.3e-06 53.9 41 61.0


User provided reference genes

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