Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.7e-87 325.9 157 100.0
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.5e-54 215.7 111 91.0
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.3e-50 203.4 111 82.0
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.3e-50 203.4 111 84.7
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.9e-50 202.2 127 74.8
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 3.8e-50 201.8 111 83.8
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 5.0e-50 201.4 127 74.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 5.0e-50 201.4 111 81.1
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 8.5e-50 200.7 111 82.0
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.5e-49 199.1 111 79.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.2e-49 198.7 134 70.1
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 3.2e-49 198.7 111 82.0
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 4.2e-49 198.4 110 81.8
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 4.2e-49 198.4 111 82.0
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 5.5e-49 198.0 111 83.8
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 7.2e-49 197.6 111 79.3
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 9.4e-49 197.2 111 82.9
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.1e-48 196.1 111 79.3
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 2.7e-48 195.7 111 77.5
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.7e-48 195.7 111 76.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 2.7e-48 195.7 111 80.2
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.6e-48 195.3 111 78.4
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 7.9e-48 194.1 111 78.4
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 7.9e-48 194.1 111 79.3
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 7.9e-48 194.1 111 78.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.0e-47 193.7 111 79.3
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.4e-47 193.4 111 78.4
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.4e-47 193.4 111 81.1
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.4e-47 193.4 111 78.4
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.4e-47 193.4 111 78.4
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 2.3e-47 192.6 110 78.2
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.3e-47 192.6 111 77.5
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.3e-47 192.6 111 78.4
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.3e-47 192.6 111 77.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.0e-47 192.2 111 76.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 3.0e-47 192.2 111 80.2
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 3.0e-47 192.2 111 79.3
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 3.9e-47 191.8 111 77.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 3.9e-47 191.8 111 77.5
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.9e-47 191.8 111 77.5
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 5.1e-47 191.4 111 77.5
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 5.1e-47 191.4 111 77.5
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.7e-47 191.0 111 77.5
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 6.7e-47 191.0 111 76.6
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 8.8e-47 190.7 123 71.5
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 8.8e-47 190.7 111 78.4
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 8.8e-47 190.7 111 77.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 8.8e-47 190.7 111 80.2
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.1e-46 190.3 111 76.6
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.1e-46 190.3 111 76.6
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.5e-46 189.9 111 79.3
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.5e-46 189.9 111 76.6
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.5e-46 189.9 111 77.5
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 2.0e-46 189.5 111 77.5
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.0e-46 189.5 111 76.6
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 2.0e-46 189.5 111 78.4
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.0e-46 189.5 111 75.7
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 2.6e-46 189.1 111 76.6
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.6e-46 189.1 111 76.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 2.6e-46 189.1 111 77.5
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 3.3e-46 188.7 149 61.7
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 3.3e-46 188.7 149 61.7
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.3e-46 188.7 111 76.6
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.4e-46 188.3 111 75.7
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.4e-46 188.3 111 74.8
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 4.4e-46 188.3 111 79.3
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 5.7e-46 188.0 149 61.7
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.7e-46 188.0 111 75.7
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 7.4e-46 187.6 111 75.7
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 9.7e-46 187.2 111 74.8
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 1.7e-45 186.4 111 74.8
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.7e-45 186.4 111 75.7
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.7e-45 186.4 111 75.7
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 2.2e-45 186.0 108 76.9
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.2e-45 186.0 149 60.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.8e-45 185.7 111 75.7
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 3.7e-45 185.3 109 78.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 3.7e-45 185.3 111 74.8
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.7e-45 185.3 111 74.8
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 4.8e-45 184.9 111 74.8
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 8.2e-45 184.1 125 68.8
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-44 183.7 145 61.4
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.1e-44 183.7 110 77.3
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.4e-44 183.3 125 68.8
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.4e-44 183.3 123 66.7
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 4.1e-44 181.8 111 73.0
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 6.9e-44 181.0 133 64.7
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 6.9e-44 181.0 155 59.4
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.2e-43 180.3 111 73.9
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.5e-43 179.9 97 83.5
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.0e-43 179.5 111 73.9
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.0e-43 179.5 111 72.1
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.4e-43 178.7 162 57.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.5e-43 178.3 116 70.7
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 4.5e-43 178.3 111 72.1
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 7.7e-43 177.6 132 64.4
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.0e-42 177.2 105 75.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.2e-42 176.0 145 57.9
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 2.9e-42 175.6 111 73.0
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.0e-42 174.9 110 71.8
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 6.5e-42 174.5 111 71.2
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.4e-41 173.3 110 74.5
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 7.9e-40 167.5 110 66.4
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 3.9e-39 165.2 99 72.7
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 3.3e-38 162.2 91 83.5
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.8e-37 158.3 97 75.3
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.4e-36 156.8 91 76.9
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.4e-36 156.0 111 70.3
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 7.0e-36 154.5 160 50.6
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.6e-35 152.5 109 59.6
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 5.5e-33 144.8 109 62.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 9.4e-33 144.1 111 59.5
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.1e-32 142.9 98 69.4
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 3.6e-32 142.1 90 67.8
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.2e-29 131.0 103 59.2
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.6e-27 126.7 75 78.7
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.6e-27 126.7 67 85.1
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 5.9e-27 124.8 110 50.0
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 5.9e-27 124.8 67 83.6
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.8e-26 122.1 111 51.4
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.5e-25 120.2 67 83.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 5.5e-25 118.2 67 77.6
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 7.2e-25 117.9 68 80.9
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.7e-24 115.9 67 77.6
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 3.4e-22 109.0 97 51.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 4.5e-19 98.6 107 43.9
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 7.7e-19 97.8 56 80.4
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 6.8e-15 84.7 114 36.8
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.4e-12 77.0 67 58.2
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 5.0e-10 68.6 46 71.7
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 2.1e-08 63.2 36 75.0
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 8.0e-08 61.2 43 62.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 4.4e-06 55.5 36 63.9


User provided reference genes

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