Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.2e-101 373.2 193 100.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.8e-79 298.9 176 90.3
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 3.3e-56 222.2 176 65.9
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 7.4e-56 221.1 176 68.2
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.7e-55 219.9 176 67.0
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.4e-54 216.1 176 64.8
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 2.2e-52 209.5 176 63.6
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 2.1e-50 203.0 186 55.9
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.7e-50 202.6 175 57.7
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 4.7e-50 201.8 175 60.0
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 4.7e-50 201.8 193 57.5
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 5.2e-49 198.4 175 58.9
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 6.8e-49 198.0 176 60.2
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 8.8e-49 197.6 175 58.9
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 8.8e-49 197.6 175 56.0
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.2e-48 197.2 175 57.1
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.2e-48 197.2 175 59.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.2e-48 197.2 175 57.1
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.5e-48 196.8 175 58.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.5e-48 196.8 176 57.4
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 5.7e-48 194.9 175 55.4
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 9.7e-48 194.1 175 57.1
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 9.7e-48 194.1 175 57.1
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 9.7e-48 194.1 175 56.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 9.7e-48 194.1 175 57.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.3e-47 193.7 176 58.0
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.2e-47 193.0 175 55.4
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 4.8e-47 191.8 176 59.1
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 8.3e-47 191.0 168 60.1
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-46 190.7 175 57.1
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 9.1e-46 187.6 175 55.4
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 5.9e-45 184.9 173 53.2
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 7.7e-45 184.5 176 52.3
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.0e-44 184.1 176 53.4
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.2e-44 183.0 175 52.6
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 3.8e-44 182.2 175 56.6
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 8.5e-44 181.0 175 56.0
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.1e-43 180.6 175 56.0
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.5e-43 180.3 175 56.6
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.5e-43 179.5 175 54.3
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.5e-43 179.5 175 56.0
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 3.2e-43 179.1 172 51.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 4.2e-43 178.7 175 54.9
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 7.2e-43 177.9 175 54.9
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.1e-42 176.4 176 52.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.7e-42 176.0 175 53.1
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 6.1e-42 174.9 175 50.9
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.0e-41 174.1 176 54.0
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 5.2e-41 171.8 176 51.1
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 6.8e-41 171.4 175 53.7
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 8.8e-41 171.0 176 53.4
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.5e-40 170.2 175 50.9
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.0e-40 169.9 175 48.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 1.3e-39 167.2 170 52.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.2e-39 166.4 170 52.9
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.8e-39 166.0 173 50.3
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.9e-39 165.2 175 52.6
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 4.9e-39 165.2 176 47.2
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 6.3e-39 164.9 170 53.5
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 8.3e-39 164.5 175 52.6
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 8.3e-39 164.5 170 52.4
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 8.3e-39 164.5 175 49.1
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.1e-38 164.1 170 51.8
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 1.4e-38 163.7 176 48.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.4e-38 163.7 175 49.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.4e-38 162.9 175 51.4
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.4e-38 162.9 175 50.9
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 4.1e-38 162.2 173 48.6
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 4.1e-38 162.2 175 48.6
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.1e-38 162.2 175 48.6
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 5.4e-38 161.8 170 51.2
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 7.0e-38 161.4 175 50.3
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.6e-37 160.2 168 51.2
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.7e-37 159.5 170 51.8
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.7e-37 159.5 170 52.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.7e-37 159.5 188 47.3
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 3.5e-37 159.1 168 50.6
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 4.5e-37 158.7 170 51.8
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 5.9e-37 158.3 175 49.1
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.3e-36 157.1 149 55.7
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.3e-36 156.4 175 47.4
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 1.1e-35 154.1 170 48.2
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 5.5e-35 151.8 170 49.4
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 8.0e-34 147.9 195 45.1
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 4.0e-33 145.6 174 42.5
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 4.0e-33 145.6 147 50.3
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.1e-30 137.5 169 48.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.6e-29 133.7 172 43.6
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.8e-26 122.9 172 38.4
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 5.2e-25 118.6 174 39.1
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.3e-23 114.0 176 42.6
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.9e-19 100.1 176 33.5
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 2.1e-13 80.1 97 46.4
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 6.0e-13 78.6 168 33.9
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.9e-11 73.6 62 66.1
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 8.4e-07 58.2 181 27.6
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.4e-06 57.4 41 56.1
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.4e-06 57.4 41 56.1


User provided reference genes

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