Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.2e-127 458.4 222 100.0
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 8.2e-75 284.3 240 64.6
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.8e-67 258.5 215 65.1
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 6.5e-64 248.1 212 64.6
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.8e-61 240.0 217 62.7
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-58 228.4 264 50.4
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-56 223.8 225 55.1
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-56 223.8 225 55.6
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-56 223.8 225 55.1
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 1.3e-56 223.8 224 57.6
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-55 220.3 225 55.1
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-55 220.3 225 54.2
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-55 219.5 225 54.2
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-55 219.2 225 54.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-55 217.6 264 48.9
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-54 216.1 206 56.3
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-54 216.1 206 56.3
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-54 214.9 212 56.1
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-54 214.9 216 56.0
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-53 213.4 210 55.7
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-52 210.3 225 52.9
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-52 209.9 225 52.4
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 4.6e-49 198.7 144 70.8
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-49 198.4 245 49.0
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-47 191.8 226 50.9
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-46 189.1 264 46.2
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-45 185.3 209 51.2
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 5.2e-45 185.3 208 52.4
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-42 175.6 211 50.7
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-42 174.5 162 59.3
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-42 174.5 211 50.7
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 7.8e-41 171.4 230 48.3
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-41 171.4 195 52.3
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-40 171.0 154 63.6
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-40 171.0 185 50.3
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-39 167.5 193 52.3
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-39 166.0 207 47.8
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-39 166.0 207 47.8
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-39 164.9 222 45.0
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-37 160.6 223 47.1
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-35 151.8 267 41.9
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-35 151.4 232 40.9
CSS0023292 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.4e-34 150.6 110 67.3
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-34 149.1 221 42.5
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-34 148.7 206 44.7
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-33 145.6 238 39.9
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.3e-32 144.1 265 38.5
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-31 139.0 226 39.4
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-31 138.7 217 42.4
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-31 138.3 150 52.0
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-31 137.9 197 44.7
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-30 136.3 150 50.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-29 132.5 207 41.5
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.4e-28 129.4 260 33.8
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-28 128.6 166 43.4
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.7e-27 127.1 125 59.2
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-27 126.3 208 40.9
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-27 126.3 145 48.3
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-27 125.9 155 51.6
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-27 124.8 216 39.4
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-25 120.2 117 56.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.6e-25 119.0 227 38.3
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-24 116.7 211 40.8
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-24 116.7 217 38.2
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 3.9e-24 115.9 203 39.9
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 6.6e-24 115.2 102 60.8
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-23 114.0 124 54.0
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.3e-23 112.8 219 37.4
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-23 112.5 207 38.2
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 9.6e-23 111.3 207 36.2
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-22 110.5 204 36.3
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-22 110.2 223 35.9
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-22 110.2 215 36.3
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-22 109.8 183 39.9
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 6.2e-22 108.6 218 33.9
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-21 107.1 224 33.5
MD16G1129400 Malus domestica HOM05D000001 ORTHO05D022832 3.1e-21 106.3 156 43.6
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-20 104.0 196 36.2
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 1.5e-20 104.0 224 33.0
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 7.6e-20 101.7 155 38.1
SHI12029 Sapria himalayana HOM05D000002 ORTHO05D004433 1.9e-18 97.1 160 41.9
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-18 94.7 92 53.3
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.2e-17 94.4 225 32.4
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-17 93.6 223 31.4
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 2.1e-17 93.6 220 32.7
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 2.1e-17 93.6 102 49.0
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-17 93.2 138 44.9
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-16 91.3 170 37.1
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-16 90.1 211 32.7
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.0e-16 89.7 218 30.7
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.7e-16 88.2 244 30.7
GSVIVG01013966001 Vitis vinifera HOM05D000002 ORTHO05D004433 8.7e-16 88.2 70 64.3
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 7.3e-15 85.1 166 38.6
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-14 83.2 71 60.6
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.1e-14 81.6 138 39.9
SHI08990 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-12 77.0 187 33.2
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 3.4e-12 76.3 92 44.6
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.5e-12 75.9 186 33.3
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.7e-11 73.9 99 37.4
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.4e-10 70.9 77 45.5
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.4e-10 70.9 188 33.0
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.4e-10 70.1 153 31.4
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 4.2e-10 69.3 145 36.6
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 4.2e-10 69.3 81 46.9
SHI14847 Sapria himalayana HOM05D000002 ORTHO05D004433 4.2e-10 69.3 79 45.6
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-10 68.9 68 52.9
SHI21268 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-10 68.9 68 52.9
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 7.1e-10 68.6 152 35.5
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.2e-09 67.8 206 28.6
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 1.6e-09 67.4 153 35.3
CSS0010788 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.6e-09 65.9 53 62.3
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 7.9e-09 65.1 141 34.8
Nn8g39617 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.9e-09 65.1 171 31.0
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.0e-08 64.7 76 46.1
Oeu010596.1 Olea europaea HOM05D000002 ORTHO05D004433 1.0e-08 64.7 126 39.7
Cpa.g.sc3.333 Carica papaya HOM05D000002 ORTHO05D004433 1.8e-08 63.9 69 56.5
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 5.1e-08 62.4 37 70.3
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-08 61.6 83 43.4
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 8.7e-08 61.6 148 32.4
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 8.7e-08 61.6 41 68.3
Nn4g24818 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-07 60.5 78 48.7
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 4.3e-07 59.3 122 35.2
SHI04837 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-07 58.9 179 29.6
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 7.4e-07 58.5 152 29.6
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 9.6e-07 58.2 37 64.9
CANSAT80G2738 Cannabis sativa HOM05D000073 ORTHO05D000033 9.6e-07 58.2 81 42.0
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 9.6e-07 58.2 123 34.1
Oeu019217.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-06 57.0 160 32.5
Ca_02351_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-06 56.6 140 30.7
Ca_27230_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-06 56.6 199 29.6
SHI19970 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-06 55.8 186 26.3
Ca_26898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.1e-06 55.1 133 30.1
COL.COLO4_04064 Corchorus olitorius HOM05D000002 ORTHO05D004433 8.1e-06 55.1 122 31.1
Duzib138G1479 Durio zibethinus HOM05D000002 ORTHO05D000001 8.1e-06 55.1 77 39.0


User provided reference genes

Program Settings