Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 6.7e-131 470.7 238 100.0
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.9e-130 469.2 238 99.6
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.0e-91 340.5 236 77.1
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.8e-83 313.2 229 73.4
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 6.7e-83 311.2 230 73.5
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.2e-81 306.2 238 68.9
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 8.2e-81 304.3 238 68.5
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 1.1e-77 293.9 232 67.7
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 4.2e-77 292.0 236 66.9
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 5.5e-77 291.6 236 67.4
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.1e-76 289.7 237 63.3
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 2.1e-76 289.7 241 65.6
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 2.7e-76 289.3 236 64.8
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.7e-76 289.3 240 65.8
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 8.0e-76 287.7 236 64.8
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.4e-75 287.0 241 65.1
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 4.0e-75 285.4 238 66.4
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 8.8e-75 284.3 236 66.5
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.2e-74 283.9 236 63.1
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 2.6e-74 282.7 236 65.3
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 5.7e-74 281.6 166 83.1
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 5.7e-74 281.6 235 65.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.3e-73 280.4 166 82.5
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.3e-73 280.4 241 65.1
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 2.2e-73 279.6 228 67.1
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 3.7e-73 278.9 238 66.0
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.4e-72 276.9 205 70.7
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.4e-72 276.9 233 67.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 2.4e-72 276.2 205 70.2
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.4e-72 276.2 231 64.5
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.4e-72 275.0 234 62.4
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 9.1e-72 274.2 245 60.4
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 2.0e-71 273.1 166 80.7
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.0e-71 273.1 235 64.7
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 3.5e-71 272.3 232 62.5
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 3.5e-71 272.3 142 90.8
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.3e-70 270.4 165 82.4
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.3e-70 270.4 243 64.6
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.3e-70 270.4 170 78.8
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 1.7e-70 270.0 167 80.8
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.8e-70 268.9 158 81.6
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 5.0e-70 268.5 239 61.5
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 6.6e-70 268.1 201 71.1
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 6.6e-70 268.1 233 64.8
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.1e-69 267.3 237 61.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 1.1e-69 267.3 238 63.0
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.5e-69 266.2 237 61.6
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 3.3e-69 265.8 167 76.6
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 5.5e-69 265.0 226 63.7
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 7.2e-69 264.6 205 67.8
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.2e-68 263.8 236 59.3
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.2e-68 263.8 167 76.6
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.2e-68 263.8 136 93.4
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.6e-68 263.5 148 83.8
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 2.8e-68 262.7 233 64.8
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 3.6e-68 262.3 241 61.4
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 6.1e-68 261.5 172 75.6
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 8.0e-68 261.2 142 85.9
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.0e-67 260.8 230 65.2
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.0e-67 258.8 168 76.8
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 4.0e-67 258.8 181 71.3
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 4.0e-67 258.8 224 63.8
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 5.2e-67 258.5 142 85.2
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 5.2e-67 258.5 170 75.9
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 5.2e-67 258.5 232 61.2
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 5.2e-67 258.5 220 64.1
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 8.9e-67 257.7 134 90.3
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.2e-66 257.3 234 61.1
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 1.2e-66 257.3 233 61.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.5e-66 256.9 148 83.1
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.3e-65 253.8 242 58.3
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 2.8e-65 252.7 151 78.8
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 8.3e-65 251.1 140 82.9
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 8.3e-65 251.1 222 61.3
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 1.1e-64 250.8 150 79.3
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.8e-64 250.0 241 58.1
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.1e-64 249.2 139 84.2
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.2e-63 247.3 154 75.3
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.2e-63 247.3 154 75.3
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.6e-63 246.9 140 81.4
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.6e-63 246.9 158 73.4
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 7.8e-63 244.6 136 84.6
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.6e-62 241.5 241 56.8
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 8.6e-62 241.1 133 85.7
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.9e-61 240.0 173 66.5
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.9e-61 240.0 165 72.7
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.9e-61 240.0 165 72.7
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 2.5e-61 239.6 199 61.8
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 4.7e-60 235.3 128 88.3
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.4e-59 233.8 129 86.0
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.4e-59 233.8 150 72.0
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 1.8e-59 233.4 146 76.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.5e-58 230.3 220 59.5
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 5.8e-58 228.4 171 64.3
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.1e-52 209.9 139 70.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.9e-45 186.8 97 86.6
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 3.6e-44 182.6 89 93.3
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 4.4e-42 175.6 228 50.0
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.3e-41 174.1 130 63.1
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.9e-40 170.2 159 51.6
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 9.2e-40 167.9 159 57.9
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 3.0e-38 162.9 177 54.8
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 5.6e-37 158.7 214 46.7
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 8.1e-36 154.8 74 94.6
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 2.6e-34 149.8 132 56.8
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 9.9e-34 147.9 101 73.3
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.3e-33 147.5 108 70.4
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 4.2e-32 142.5 173 51.4
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 9.2e-32 141.4 113 62.8
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.0e-30 137.9 72 91.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.1e-29 134.4 77 85.7
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.4e-26 122.9 67 82.1
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 6.0e-23 112.1 56 91.1
Actinidia00722 Actinidia chinensis HOM05D007078 ORTHO05D057819 8.4e-09 65.1 83 54.2


User provided reference genes

Program Settings