Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 7.0e-184 647.1 321 100.0
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 1.9e-112 409.8 321 65.4
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 1.4e-104 383.6 322 64.9
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 5.5e-96 355.1 279 65.2
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 2.4e-83 313.2 321 56.1
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 8.5e-81 304.7 378 47.9
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.1e-80 304.3 360 48.1
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 3.6e-79 299.3 255 56.5
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 8.0e-79 298.1 381 45.7
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 1.0e-78 297.7 248 58.9
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 5.2e-78 295.4 371 46.4
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 1.5e-77 293.9 246 58.9
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 5.7e-77 292.0 373 46.4
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 9.7e-77 291.2 239 58.6
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 9.7e-77 291.2 227 60.8
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 1.3e-76 290.8 248 56.5
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 2.2e-76 290.0 374 44.4
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 2.2e-76 290.0 372 46.2
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 2.8e-76 289.7 238 58.4
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 8.3e-76 288.1 227 60.4
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 1.4e-75 287.3 227 60.8
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 7.0e-75 285.0 248 54.8
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 8.5e-73 278.1 364 44.0
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 3.2e-72 276.2 240 55.0
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 3.2e-72 276.2 346 46.5
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 4.2e-72 275.8 317 51.1
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 9.4e-72 274.6 321 48.3
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.6e-71 273.9 362 43.4
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 2.1e-71 273.5 246 55.3
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 6.1e-71 271.9 430 38.4
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 8.8e-70 268.1 325 47.4
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 6.3e-68 261.9 370 43.2
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 1.4e-62 244.2 167 65.3
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 1.1e-59 234.6 211 53.1
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 8.3e-52 208.4 260 50.0
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 4.0e-30 136.3 291 36.8
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 5.8e-13 79.3 190 29.5
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 1.1e-11 75.1 192 27.1
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 3.0e-09 67.0 179 31.3
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 6.7e-09 65.9 187 29.9
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 8.7e-09 65.5 132 30.3
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 8.7e-09 65.5 164 28.0
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 2.5e-08 63.9 157 31.2
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 9.6e-08 62.0 207 26.6
Nn7g36495 Nelumbo nucifera HOM05D000886 ORTHO05D000525 3.7e-07 60.1 156 30.8
Gohir.A11G245100 Gossypium hirsutum HOM05D000886 ORTHO05D000525 1.1e-06 58.5 109 37.6
GSVIVG01025807001 Vitis vinifera HOM05D000886 ORTHO05D000525 1.4e-06 58.2 112 32.1
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 2.4e-06 57.4 152 32.2
Ah.02g112490 Amaranthus hybridus HOM05D000886 ORTHO05D000525 4.0e-06 56.6 118 34.7
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 4.0e-06 56.6 152 32.2
SalBow6G0974 Salvia bowleyana HOM05D000886 ORTHO05D000525 4.0e-06 56.6 147 30.6
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 5.3e-06 56.2 109 37.6
PSO761G0004 Papaver somniferum HOM05D000886 ORTHO05D000525 5.3e-06 56.2 156 34.0
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 6.9e-06 55.8 148 27.7
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 6.9e-06 55.8 153 34.6


User provided reference genes

Program Settings