Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.2e-51 205.3 100 100.0
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.3e-45 185.3 101 91.1
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.5e-44 180.3 101 88.1
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.4e-42 176.0 103 85.4
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.1e-42 173.7 104 83.7
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.9e-27 125.2 102 65.7
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 5.4e-26 120.9 100 65.0
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 3.5e-25 118.2 100 64.0
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 7.8e-25 117.1 100 64.0
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 7.8e-25 117.1 100 64.0
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 1.7e-24 115.9 91 68.1
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.5e-23 112.8 100 61.0
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 2.5e-23 112.1 94 61.7
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.4e-21 106.3 106 54.7
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 3.1e-21 105.1 100 56.0
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 6.9e-21 104.0 100 55.0
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 9.0e-21 103.6 100 55.0
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 2.6e-20 102.1 97 56.7
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 4.5e-20 101.3 94 55.3
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.7e-19 99.4 100 58.0
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 4.9e-19 97.8 100 54.0
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 4.9e-19 97.8 93 53.8
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 1.9e-18 95.9 97 53.6
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 4.2e-18 94.7 100 47.0
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 7.1e-18 94.0 98 53.1
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 9.3e-18 93.6 94 53.2
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 1.2e-17 93.2 97 50.5
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 2.1e-17 92.4 97 51.5
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 2.1e-17 92.4 97 52.6
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 2.7e-17 92.0 102 51.0
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 6.0e-17 90.9 100 49.0
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 7.9e-17 90.5 88 54.5
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 1.3e-16 89.7 97 48.5
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 2.3e-16 89.0 100 50.0
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 2.3e-16 89.0 97 49.5
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 6.7e-16 87.4 95 47.4
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.1e-15 86.7 100 53.0
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 1.9e-15 85.9 93 51.6
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 2.5e-15 85.5 97 49.5
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 7.4e-15 84.0 100 50.0
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 1.3e-14 83.2 97 49.5
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.6e-14 82.8 98 50.0
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 2.1e-14 82.4 96 47.9
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 4.8e-14 81.3 101 46.5
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.1e-13 80.1 97 46.4
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 1.4e-13 79.7 94 47.9
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 2.4e-13 79.0 98 48.0
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 5.3e-13 77.8 88 47.7
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 6.9e-13 77.4 91 49.5
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 6.9e-13 77.4 97 49.5
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 9.0e-13 77.0 97 45.4
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 2.0e-12 75.9 98 46.9
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 2.0e-12 75.9 94 46.8
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 2.6e-12 75.5 97 48.5
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 2.6e-12 75.5 97 48.5
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 4.5e-12 74.7 97 48.5
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 4.5e-12 74.7 97 44.3
Actinidia08019 Actinidia chinensis HOM05D004838 ORTHO05D005373 5.8e-12 74.3 99 47.5
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 5.8e-12 74.3 100 44.0
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 5.8e-12 74.3 97 45.4
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 5.8e-12 74.3 98 44.9
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 1.3e-11 73.2 100 41.0
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 2.9e-11 72.0 97 39.2
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.8e-11 71.6 98 46.9
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 3.8e-11 71.6 88 48.9
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 3.8e-11 71.6 97 46.4
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 3.8e-11 71.6 97 46.4
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 3.8e-11 71.6 97 42.3
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 6.5e-11 70.9 97 44.3
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 8.4e-11 70.5 88 47.7
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 8.4e-11 70.5 98 45.9
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 2.5e-10 68.9 97 44.3
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 2.5e-10 68.9 98 45.9
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 2.5e-10 68.9 97 40.2
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 4.2e-10 68.2 97 42.3
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 4.2e-10 68.2 97 38.1
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 7.1e-10 67.4 100 42.0
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 9.3e-10 67.0 94 42.6
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 1.2e-09 66.6 99 47.5
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.6e-09 66.2 91 45.1
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 1.6e-09 66.2 96 42.7
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 6.0e-09 64.3 78 44.9
MBI18_g19832_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 1.0e-08 63.5 100 41.0
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 1.3e-08 63.2 98 48.0
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 1.8e-08 62.8 96 39.6
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 3.9e-08 61.6 97 40.2
MBI18_g27682_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 5.1e-08 61.2 100 40.0
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 8.7e-08 60.5 97 44.3
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 1.1e-07 60.1 97 35.1
Sc21g0002490 Simmondsia chinensis HOM05D004838 ORTHO05D005373 1.1e-07 60.1 98 38.8
Migut.H01016 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.5e-07 59.7 96 43.8
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.3e-07 58.5 90 43.3
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 7.4e-07 57.4 97 41.2
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 7.4e-07 57.4 97 41.2
RcHm_v2.0_Chr2g0161551 Rosa chinensis HOM05D004838 ORTHO05D005373 9.6e-07 57.0 94 37.2
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 1.3e-06 56.6 97 43.3
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 1.6e-06 56.2 92 40.2
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 2.8e-06 55.5 101 37.6
Haze_06585 Corylus avellana HOM05D004838 ORTHO05D005373 3.7e-06 55.1 100 38.0
Lalb_Chr22g0356341 Lupinus albus HOM05D004838 ORTHO05D005373 3.7e-06 55.1 94 37.2
Nitab4.5_0011184g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.7e-06 55.1 91 39.6
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 4.8e-06 54.7 100 38.0
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 4.8e-06 54.7 100 38.0
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 4.8e-06 54.7 81 42.0
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 6.2e-06 54.3 92 34.8
FAN05G2643 Fragaria x ananassa HOM05D004838 ORTHO05D005373 6.2e-06 54.3 97 42.3
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 8.2e-06 53.9 97 32.0


User provided reference genes

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