Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036876 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D003825 7.4e-28 126.3 57 100.0
Lsat_1_v5_gn_5_81081 Lactuca sativa HOM05D000513 ORTHO05D003825 7.4e-12 73.2 60 61.7
Rhsim01G0106500 Rhododendron simsii HOM05D000513 ORTHO05D003825 7.4e-12 73.2 62 61.3
Migut.J00854 Erythranthe guttata HOM05D000513 ORTHO05D003825 2.2e-11 71.6 60 56.7
PGR044G0413 Punica granatum HOM05D000513 ORTHO05D003825 2.8e-11 71.2 60 60.0
Nn8g41230 Nelumbo nucifera HOM05D000513 ORTHO05D003825 3.7e-11 70.9 60 58.3
vmacro20744 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 4.8e-11 70.5 60 56.7
Cfa012887 Carpinus fangiana HOM05D000513 ORTHO05D003825 6.3e-11 70.1 63 58.7
Atru.chr7.995 Acer truncatum HOM05D000513 ORTHO05D003825 8.2e-11 69.7 60 58.3
Hma1.2p1_0411F.1_g147060 Hydrangea macrophylla HOM05D000513 ORTHO05D003825 8.2e-11 69.7 60 55.0
Nitab4.5_0000170g0160 Nicotiana tabacum HOM05D000513 ORTHO05D003825 1.1e-10 69.3 60 60.0
Solyc07g042830.4 Solanum lycopersicum HOM05D000513 ORTHO05D003825 1.4e-10 68.9 60 58.3
Sopen07g022460 Solanum pennellii HOM05D000513 ORTHO05D003825 1.4e-10 68.9 60 58.3
Peaxi162Scf00474g00313 Petunia axillaris HOM05D000513 ORTHO05D003825 1.8e-10 68.6 58 58.6
SalBow6G1032 Salvia bowleyana HOM05D000513 ORTHO05D003825 1.8e-10 68.6 63 58.7
DCAR_020450 Daucus carota HOM05D000513 ORTHO05D003825 2.4e-10 68.2 60 58.3
HanXRQChr10g0309461 Helianthus annuus HOM05D000513 ORTHO05D003825 2.4e-10 68.2 60 56.7
Cc06_g23740 Coffea canephora HOM05D000513 ORTHO05D003825 3.1e-10 67.8 60 53.3
Eucgr.C02159 Eucalyptus grandis HOM05D000513 ORTHO05D003825 4.1e-10 67.4 60 56.7
QL11p007112 Quercus lobata HOM05D000513 ORTHO05D003825 5.3e-10 67.0 60 55.0
Sabra18G0126300 Salix brachista HOM05D000513 ORTHO05D003825 5.3e-10 67.0 62 54.8
Actinidia02548 Actinidia chinensis HOM05D000513 ORTHO05D003825 6.9e-10 66.6 60 53.3
MSTRG.19407 Avicennia marina HOM05D000513 ORTHO05D003825 9.1e-10 66.2 60 56.7
Dinv26492 Davidia involucrata HOM05D000513 ORTHO05D003825 9.1e-10 66.2 58 56.9
Oeu000959.1 Olea europaea HOM05D000513 ORTHO05D003825 9.1e-10 66.2 60 58.3
Potri.018G149500 Populus trichocarpa HOM05D000513 ORTHO05D003825 2.0e-09 65.1 62 54.8
Lju50C25T2 Lonicera japonica HOM05D000513 ORTHO05D003825 2.2e-08 61.6 60 50.0
PGSC0003DMG401013540 Solanum tuberosum HOM05D000513 ORTHO05D003825 2.2e-08 61.6 56 57.1
TAR383G0183 Trochodendron aralioides HOM05D000513 ORTHO05D003825 2.2e-08 61.6 60 51.7
CiPaw.08G000700 Carya illinoinensis HOM05D000513 ORTHO05D003825 2.9e-08 61.2 57 52.6
MBI16_g00829_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D003825 3.8e-08 60.8 60 50.0
Hund03216 Selenicereus undatus HOM05D000513 ORTHO05D003825 1.1e-07 59.3 60 51.7
CDE06G1650 Ceratophyllum demersum HOM05D000513 ORTHO05D003825 1.9e-07 58.5 60 50.0
Haze_21252 Corylus avellana HOM05D000513 ORTHO05D003825 2.5e-07 58.2 66 45.5
SMO364G0449 Selaginella moellendorffii HOM05D000513 ORTHO05D003825 3.2e-07 57.8 59 52.5
EL10Ac2g03611 Beta vulgaris HOM05D000513 ORTHO05D003825 4.2e-07 57.4 61 49.2
MD13G1285500 Malus domestica HOM05D000513 ORTHO05D003825 4.2e-07 57.4 58 51.7
Prupe.6G144700 Prunus persica HOM05D000513 ORTHO05D003825 7.2e-07 56.6 58 50.0
Ah.11g043540 Amaranthus hybridus HOM05D000513 ORTHO05D003825 2.1e-06 55.1 61 47.5
AUR62020744 Chenopodium quinoa HOM05D000513 ORTHO05D003825 2.1e-06 55.1 58 48.3
CSS0028922 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D003825 2.7e-06 54.7 68 47.1
FvH4_4g00200 Fragaria vesca HOM05D000513 ORTHO05D003825 3.6e-06 54.3 57 50.9
FAN12G3115 Fragaria x ananassa HOM05D000513 ORTHO05D003825 3.6e-06 54.3 57 50.9
AagrBONN_evm.TU.Sc2ySwM_344.145 Anthoceros agrestis HOM05D000513 ORTHO05D003825 4.7e-06 53.9 60 41.7
Mapoly0065s0020 Marchantia polymorpha HOM05D000513 ORTHO05D003825 4.7e-06 53.9 59 42.4
GSVIVG01032233001 Vitis vinifera HOM05D000513 ORTHO05D003825 4.7e-06 53.9 60 48.3


User provided reference genes

Program Settings