Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.4e-44 180.6 94 100.0
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.6e-38 160.2 106 84.0
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.5e-33 145.2 107 75.7
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.4e-33 143.7 109 73.4
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.6e-33 143.3 105 76.2
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.8e-32 141.0 111 73.0
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.9e-30 133.3 74 94.6
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.9e-29 131.0 74 93.2
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-27 125.9 74 90.5
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.9e-27 123.6 104 68.3
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.8e-26 122.5 74 86.5
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.4e-23 112.8 66 89.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.6e-16 89.4 74 59.5
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 3.8e-13 78.2 75 61.3
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.1e-11 72.4 77 57.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 1.4e-10 69.7 75 56.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.1e-09 66.6 77 49.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.5e-09 66.2 75 50.7
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.5e-09 66.2 75 52.0
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 2.5e-09 65.5 63 52.4
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-08 63.2 74 50.0
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 2.8e-08 62.0 75 49.3
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 3.7e-08 61.6 57 54.4
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 3.7e-08 61.6 57 56.1
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 3.7e-08 61.6 76 52.6
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 6.3e-08 60.8 59 50.8
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 6.3e-08 60.8 76 51.3
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-07 60.1 57 54.4
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 1.1e-07 60.1 78 51.3
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 9.1e-07 57.0 44 59.1
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 9.1e-07 57.0 80 43.8
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 9.1e-07 57.0 44 59.1
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.0e-06 55.8 83 42.2
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 2.0e-06 55.8 60 48.3
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 3.4e-06 55.1 77 44.2
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 3.4e-06 55.1 73 42.5
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 4.5e-06 54.7 78 46.2


User provided reference genes

Program Settings