Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.7e-51 205.7 100 100.0
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.5e-23 112.8 96 54.2
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.6e-22 109.4 96 54.2
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.1e-21 105.1 93 55.9
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 3.1e-21 105.1 96 51.0
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.6e-20 102.1 93 53.8
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.8e-20 100.9 93 52.7
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.2e-18 94.7 78 56.4
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.1e-16 87.8 89 43.8
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.3e-15 85.1 97 44.3
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-15 85.1 94 46.8
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-15 84.3 86 52.3
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.6e-15 84.3 93 47.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.7e-14 81.6 94 43.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.8e-14 81.3 84 44.0
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-14 80.5 86 46.5
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 8.1e-14 80.5 77 51.9
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-13 79.3 93 44.1
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-13 79.0 84 41.7
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.4e-13 79.0 93 44.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.0e-13 78.2 93 43.0
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.2e-12 76.6 94 42.6
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.6e-12 75.5 87 43.7
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 2.2e-11 72.4 95 38.9
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 2.2e-11 72.4 100 37.0
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 2.2e-11 72.4 89 38.2
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.9e-11 72.0 91 39.6
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.8e-11 71.6 90 38.9
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.8e-11 71.6 67 50.7
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.8e-11 71.6 90 42.2
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.8e-11 71.6 90 38.9
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 4.9e-11 71.2 90 38.9
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 6.5e-11 70.9 83 47.0
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.4e-11 70.5 84 39.3
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.1e-10 70.1 90 45.6
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.1e-10 70.1 90 45.6
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 2.5e-10 68.9 82 37.8
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.2e-10 68.6 93 37.6
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 3.2e-10 68.6 88 39.8
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.2e-09 66.6 74 45.9
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.2e-09 66.6 82 39.0
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.0e-09 64.3 84 40.5
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.0e-09 64.3 82 40.2
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 1.0e-08 63.5 69 46.4
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-08 62.4 65 46.2
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 3.0e-08 62.0 75 42.7
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.1e-08 61.2 93 35.5
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 6.7e-08 60.8 62 48.4
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.7e-08 60.8 67 47.8
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 2.5e-07 58.9 90 36.7
FvH4_6g07963 Fragaria vesca HOM05D008133 ORTHO05D022573 3.3e-07 58.5 97 30.9
FvH4_3g32402 Fragaria vesca HOM05D000002 ORTHO05D000047 5.7e-07 57.8 97 29.9
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-06 56.6 53 50.9
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 6.2e-06 54.3 89 33.7
RhsimUnG0189600 Rhododendron simsii HOM05D000038 ORTHO05D000423 8.2e-06 53.9 63 41.3


User provided reference genes

Program Settings